CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27594	Canola	cytosol	96.08	95.86
Bra032805.1-P	Field mustard	cytosol	94.24	94.24
AT1G24420.1	Thale cress	cytosol	83.87	83.49
CDX73371	Canola	cytosol	2.53	68.75
CDY58243	Canola	cytosol	38.25	42.46
CDY68340	Canola	cytosol	9.22	42.11
CDY68339	Canola	cytosol	29.26	39.94
CDY68964	Canola	cytosol, peroxisome, plastid	39.63	39.72
CDY52590	Canola	cytosol	39.63	39.45
CDY22928	Canola	cytosol	40.55	39.37
CDY69720	Canola	cytosol	38.71	39.16
CDY57231	Canola	cytosol	40.32	39.15
CDY22927	Canola	cytosol	39.4	39.04
CDY60221	Canola	cytosol	38.02	38.82
CDX87148	Canola	cytosol	38.02	38.46
CDY39174	Canola	mitochondrion	39.63	37.47
CDY25643	Canola	cytosol	37.56	37.39
CDY04190	Canola	mitochondrion	39.17	37.04
CDY25648	Canola	cytosol	37.1	37.01
CDX89532	Canola	cytosol	36.87	36.78

Protein Annotations

EnsemblPlants:CDX84944	EnsemblPlantsGene:GSBRNA2T00142306001	Gene3D:3.30.559.10	GO:A0A078D9K0	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDX84944	ProteinID:CDX84944.1	SEG:seg	UniParc:UPI0004EE36F9
MapMan:50.2.3	:	:	:	:	:

Description

BnaC05g21110D

Coordinates

chrLK031839:+:485071..487329

Molecular Weight (calculated)

48225.8 Da

IEP (calculated)

5.865

GRAVY (calculated)

0.030

Length

434 amino acids

Sequence
(BLAST)

001: MENKVEVLSR EVIKPSSPTP NDKRILRLSL LDTLSSPMYT GALLFYAADP HNLLGSSSEG TSLKLKKSLS KTLPIFYPLA GRITGSFIEC NDEGAVFIEA
101: RVDHLLSEFL KCPVPESLEP LIPVEALSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAETARGLG ITMTPSFTAS KFFPLPPDEL
201: SLKPMDNKVE VEEMNYVTKR FVFDASEIKK LRAKASCNLV KNPTRVEVVT ALFWRCATKA SRLSSLTTRT SVLLIPVSIR GKVDYLPENT IGNMLSIMIL
301: KNQEGMIDGI QDVVSELRKT KENFSLRCKE MSSSIVLESL AEIGKVYGRG NEMDLWMSNS WCKLGMYEAD FGWGKPVWVT GRGTSSFKNF MLLIDAKDGE
401: GIEAWITLVD KHMSLFEQDE ELLESASLNP PVLI

Best Arabidopsis Sequence Match ( AT1G24420.1 )
(BLAST)

001: MEKNVEILSR EIVKPSSPTP DDKRILNLSL LDILSSPMYT GALLFYAADP QNLLGFSTEE TSLKLKKSLS KTLPIFYPLA GRIIGSFVEC NDEGAVFIEA
101: RVDHLLSEFL KCPVPESLEL LIPVEAKSRE AVTWPVLLIQ ANFFSCGGLV ITICVSHKIT DATSLAMFIR GWAESSRGLG ITLIPSFTAS EVFPKPLDEL
201: PSKPMDRKEE VEEMSCVTKR FVFDASKIKK LRAKASRNLV KNPTRVEAVT ALFWRCVTKV SRLSSLTPRT SVLQILVNLR GKVDSLCENT IGNMLSLMIL
301: KNEEAAIERI QDVVDEIRRA KEIFSLNCKE MSKSSSRIFE LLEEIGKVYG RGNEMDLWMS NSWCKLGLYD ADFGWGKPVW VTGRGTSHFK NLMLLIDTKD
401: GEGIEAWITL TEEQMSLFEC DQELLESASL NPPVLI

Arabidopsis Description

F21J9.8 [Source:UniProtKB/TrEMBL;Acc:Q9FYM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.