CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68340	Canola	cytosol	21.79	100.0
CDY68339	Canola	cytosol	70.41	96.54
CDY68964	Canola	cytosol, peroxisome, plastid	55.5	55.89
CDY22927	Canola	cytosol	55.5	55.25
AT5G47950.1	Thale cress	cytosol	53.44	54.69
CDX73371	Canola	cytosol	1.61	43.75
CDX84944	Canola	cytosol	39.45	39.63
CDY27594	Canola	cytosol	38.99	39.08
CDY60221	Canola	cytosol	35.78	36.71
CDY58243	Canola	cytosol	32.57	36.32
CDY69720	Canola	cytosol	35.55	36.13
CDX87148	Canola	cytosol	35.09	35.66
CDY22928	Canola	cytosol	34.4	33.56
CDY39174	Canola	mitochondrion	34.86	33.12
CDY57231	Canola	cytosol	33.72	32.89
CDY04190	Canola	mitochondrion	34.4	32.68
CDY25643	Canola	cytosol	30.73	30.73
CDY25648	Canola	cytosol	30.05	30.11
CDX89532	Canola	cytosol	30.05	30.11

Protein Annotations

EnsemblPlants:CDY52590	EnsemblPlantsGene:GSBRNA2T00007358001	Gene3D:3.30.559.10	GO:A0A078ING4	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY52590	ProteinID:CDY52590.1	UniParc:UPI0004EF0DC2	UniProt:A0A078ING4
MapMan:50.2.3	:	:	:	:	:

Description

BnaC08g49150DBnaC08g49150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ING4]

Coordinates

chrLK033106:+:18014..19324

Molecular Weight (calculated)

47816.3 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.111

Length

436 amino acids

Sequence
(BLAST)

001: MEKMSVETIK PSSATPQSLR TLHLSTVDYR MQSVYTYACL FYTNDPSIPR EETTQKLKTS LSETLTSFYP FAGRINGLAV DCNDEGAIFI EATLGNSTLS
101: AFLNSPAPDS NEIQQTLLPL HHVPKTSEAS ITWPLLLVKA SYFQCGGMCL GICMSHKLAD AASLSAFIRA WAATARGENG TVGKPEFAGI NVYPPPPLHD
201: AFKVAEIHKP KITGVTKRFV FSGSKIDELK AKVAQPRPTR VQCVTALLWR CVCAAGASET TTSTKVLFQP ANLRTKIPSL LSENLIGNLI HTSMTSSRKG
301: EEIDIQETVK ELRERGEELT SLVQENDGST TTALGSKLLV KMFNDYSKLS NEPGDSMYAV TSWCRMPFYE ANFGKGCPVW VVGNVAPRLE LVTMLLDSND
401: FKGIEAWVTL SEEDMLSFEQ NPELLAFASP NPAVIF

Best Arabidopsis Sequence Match ( AT3G30280.1 )
(BLAST)

001: METMKVETIA KEIIKPSSTT PNDLQTLQLS IYDHILPPVY TVAFLFYTKD DLISPEQSSH KLKTSLAETL TKFYPLAGRI KGVTIDCNDE GAVFVDARVN
101: NYPLSDFLRS PDFKTLQQLL PLDVIDDPYE AATTWPLLLV KATYFPCGGM AIGLCITHKI ADATSISTFI QSWAAMARGE AGDIVADPVF AAANFYPPAN
201: ELFKFPVDEN ANKISQITKR FVFSASKLEE LRTKAASEDF VGRPKRVESV TALLWKAFVA AASSNTNACD MKVLIQPSNL RPKIPSLLAE SLIGNIMFSS
301: VVLGISQQEE IKIEKAVRDL RKQGDDLQNV IKEEGGSSSA MIGSKLANLM LTNYSKLSYE THEPYTVSSW CKLPLYEASF GWGSPVWIAG NVAPMLENVT
401: MLIDSKDGQG IEAFVTLPEE NMLSLEQNTE LLAFASVNPS VLV

Arabidopsis Description

Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LI71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.