CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030190.1-P	Field mustard	cytosol	100.0	100.0
CDX89532	Canola	cytosol	96.78	96.78
CDY25643	Canola	cytosol	76.09	75.92
CDX73371	Canola	cytosol	2.53	68.75
AT4G15400.1	Thale cress	cytosol	62.07	62.07
CDY58243	Canola	cytosol	53.56	59.59
CDY22928	Canola	cytosol	59.54	57.94
CDY57231	Canola	cytosol	58.16	56.6
CDY60221	Canola	cytosol	39.54	40.47
CDX87148	Canola	cytosol	38.16	38.69
CDY27594	Canola	cytosol	37.93	37.93
CDY69720	Canola	cytosol	37.01	37.53
CDX84944	Canola	cytosol	37.01	37.1
CDY22927	Canola	cytosol	34.02	33.79
CDY68964	Canola	cytosol, peroxisome, plastid	33.56	33.72
CDY68340	Canola	cytosol	7.13	32.63
CDY52590	Canola	cytosol	30.11	30.05
CDY68339	Canola	cytosol	21.84	29.87
CDY39174	Canola	mitochondrion	31.49	29.85
CDY04190	Canola	mitochondrion	31.49	29.85

Protein Annotations

EnsemblPlants:CDY25648	EnsemblPlantsGene:GSBRNA2T00032943001	Gene3D:3.30.559.10	GO:A0A078GM15	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY25648	ProteinID:CDY25648.1	SEG:seg	UniParc:UPI00025443FD
UniProt:A0A078GM15	MapMan:50.2.3	:	:	:	:

Description

BnaA04g13400DBnaA04g13400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM15]

Coordinates

chrLK032177:-:580460..581767

Molecular Weight (calculated)

47642.3 Da

IEP (calculated)

5.301

GRAVY (calculated)

0.005

Length

435 amino acids

Sequence
(BLAST)

001: MDLEIEVMGR EVIKPATPSP HNHIQLSLLD MSIPAMYFST IFLYKSEDLV TASPEVISKK LKSSLSETLS RLYPLAGEIE GVSINCNDKG AVFTEARTNL
101: LLPEFLKTLN VDYLAELRPK IEDGDSPSGW PLLSVGVTFF GSGSGVAVSV NVSHRICDAA SLLTLVTDWS ETMANKNSNV GPHQFAEATI YPPAPPHMAS
201: QSRTTNSIKC AMNRFVFESS KIAELKRKAA SESVKMPTRV EAITSLIWKC VTKASRSNLM APRSAVMYVA VDLRLKVPSS VLSPDAIGNL QTAFFLKKDA
301: ESEVEIHETV AAFRTAKEEV DKMLKDNVQS NTLSQGLLNM MGSQAAVFKP DIDIYTTSSW LGKPFYGVDF GWGSPVWMGS ATHTVYDKLV YVSLMDSKDG
401: EGVEAWINIP AEVMSVFVHD QELLAYAVLN PPITI

Best Arabidopsis Sequence Match ( AT4G15400.1 )
(BLAST)

001: MEAKLEVTGK EVIKPASPSP RDRLQLSILD LYCPGIYVST IFFYDLITES SEVFSENLKL SLSETLSRFY PLAGRIEGLS ISCNDEGAVF TEARTDLLLP
101: DFLRNLNTDS LSGFLPTLAA GESPAAWPLL SVKVTFFGSG SGVAVSVSVS HKICDIASLV TFVKDWATTT AKGKSNSTIE FAETTIYPPP PSHMYEQFPS
201: TDSDSNITSK YVLKRFVFEP SKIAELKHKA ASESVPVPTR VEAIMSLIWR CARNSSRSNL LIPRQAVMWQ AMDIRLRIPS SVAPKDVIGN LQSGFSLKKD
301: AESEFEIPEI VATFRKNKER VNEMIKESLQ GNTIGQSLLS LMAETVSEST EIDRYIMSSW CRKPFYEVDF GSGSPVWVGY ASHTIYDNMV GVVLIDSKEG
401: DGVEAWISLP EEDMSVFVDD QELLAYAVLN PPVVA

Arabidopsis Description

BIA1BAHD acyltransferase BIA1 [Source:UniProtKB/Swiss-Prot;Acc:O23393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.