CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039928.1-P	Field mustard	cytosol	99.06	72.41
CDY52590	Canola	cytosol	96.54	70.41
CDX73371	Canola	cytosol	2.2	43.75
CDY68964	Canola	cytosol, peroxisome, plastid	54.72	40.18
AT5G47950.1	Thale cress	cytosol	53.77	40.14
CDY22927	Canola	cytosol	54.72	39.73
CDX84944	Canola	cytosol	39.94	29.26
CDY27594	Canola	cytosol	39.62	28.97
CDY58243	Canola	cytosol	32.7	26.6
CDY60221	Canola	cytosol	34.59	25.88
CDY69720	Canola	cytosol	33.65	24.94
CDX87148	Canola	cytosol	33.33	24.71
CDY22928	Canola	cytosol	33.96	24.16
CDY39174	Canola	mitochondrion	34.59	23.97
CDY04190	Canola	mitochondrion	34.28	23.75
CDY57231	Canola	cytosol	33.02	23.49
CDY25648	Canola	cytosol	29.87	21.84
CDX89532	Canola	cytosol	29.87	21.84
CDY25643	Canola	cytosol	29.25	21.33
CDY68340	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY68339	EnsemblPlantsGene:GSBRNA2T00073482001	Gene3D:3.30.559.10	GO:A0A078JNK2	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31623
PANTHER:PTHR31623:SF15	PFAM:PF02458	ProteinID:CDY68339	ProteinID:CDY68339.1	SEG:seg	UniParc:UPI0004EE5089
UniProt:A0A078JNK2	MapMan:50.2.3	:	:	:	:

Description

BnaAnng26950DBnaAnng26950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNK2]

Coordinates

chrLK037192:+:2565..3521

Molecular Weight (calculated)

34694.7 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.167

Length

318 amino acids

Sequence
(BLAST)

001: MEKMSVETIK PSSATPQSLR TLHLSTVDYR MQSVYTYACL FYTNDPSIPR EETTQKLKTS LSQTLTSFYP FAGRINGLAV DCNDEGAIFI EATLGNSTIS
101: AFLNSPAPDS NEIQQTLLPL HHVPKTSEAS ITWPLLLVKA SYFQCGGMSL GICMSHKLAD AASLSAFIRA WAATARGESG TVGKPEFAGV NVYPPPPPHD
201: AFKVAEVHKP KITGVTKRFV FSGSKIDELK AKVAQPRPTR VQCVTALLWR CVCAAAASKT TTSTKVLFQP ANLRTKIPSL LSENLIGNLI HTSMTSSRKG
301: EEIDIQETVK ELRERGRS

Best Arabidopsis Sequence Match ( AT3G30280.1 )
(BLAST)

001: METMKVETIA KEIIKPSSTT PNDLQTLQLS IYDHILPPVY TVAFLFYTKD DLISPEQSSH KLKTSLAETL TKFYPLAGRI KGVTIDCNDE GAVFVDARVN
101: NYPLSDFLRS PDFKTLQQLL PLDVIDDPYE AATTWPLLLV KATYFPCGGM AIGLCITHKI ADATSISTFI QSWAAMARGE AGDIVADPVF AAANFYPPAN
201: ELFKFPVDEN ANKISQITKR FVFSASKLEE LRTKAASEDF VGRPKRVESV TALLWKAFVA AASSNTNACD MKVLIQPSNL RPKIPSLLAE SLIGNIMFSS
301: VVLGISQQEE IKIEKAVRDL RKQGDDLQNV IKEEGGSSSA MIGSKLANLM LTNYSKLSYE THEPYTVSSW CKLPLYEASF GWGSPVWIAG NVAPMLENVT
401: MLIDSKDGQG IEAFVTLPEE NMLSLEQNTE LLAFASVNPS VLV

Arabidopsis Description

Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LI71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.