Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038086.1-P | Field mustard | cytosol | 100.0 | 3.64 |
| CDY58243 | Canola | cytosol | 81.25 | 3.32 |
| CDY25643 | Canola | cytosol | 75.0 | 2.75 |
| CDY57231 | Canola | cytosol | 75.0 | 2.68 |
| CDY22928 | Canola | cytosol | 75.0 | 2.68 |
| CDX87148 | Canola | cytosol | 68.75 | 2.56 |
| CDY69720 | Canola | cytosol | 68.75 | 2.56 |
| CDX84944 | Canola | cytosol | 68.75 | 2.53 |
| CDY25648 | Canola | cytosol | 68.75 | 2.53 |
| CDY27594 | Canola | cytosol | 68.75 | 2.53 |
| CDX89532 | Canola | cytosol | 68.75 | 2.53 |
| CDY60221 | Canola | cytosol | 62.5 | 2.35 |
| CDY68339 | Canola | cytosol | 43.75 | 2.2 |
| CDY22927 | Canola | cytosol | 50.0 | 1.83 |
| CDY52590 | Canola | cytosol | 43.75 | 1.61 |
| CDY68964 | Canola | cytosol, peroxisome, plastid | 37.5 | 1.39 |
| CDY39174 | Canola | mitochondrion | 37.5 | 1.31 |
| CDY04190 | Canola | mitochondrion | 37.5 | 1.31 |
| CDY68340 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX73371 | EnsemblPlantsGene:GSBRNA2T00106575001 | ProteinID:CDX73371 | ProteinID:CDX73371.1 | UniParc:UPI0004EF4B78 | MapMan:35.2 |
Description
BnaC05g27350D
Coordinates
chrLK031798:+:2597084..2597134
Molecular Weight (calculated)
1829.4 Da
IEP (calculated)
6.609
GRAVY (calculated)
0.106
Length
16 amino acids
Sequence
(BLAST)
(BLAST)
1: MEMKLEVVGR EVIKPA
001: MEAKLEVTGK EVIKPASPSP RDRLQLSILD LYCPGIYVST IFFYDLITES SEVFSENLKL SLSETLSRFY PLAGRIEGLS ISCNDEGAVF TEARTDLLLP
101: DFLRNLNTDS LSGFLPTLAA GESPAAWPLL SVKVTFFGSG SGVAVSVSVS HKICDIASLV TFVKDWATTT AKGKSNSTIE FAETTIYPPP PSHMYEQFPS
201: TDSDSNITSK YVLKRFVFEP SKIAELKHKA ASESVPVPTR VEAIMSLIWR CARNSSRSNL LIPRQAVMWQ AMDIRLRIPS SVAPKDVIGN LQSGFSLKKD
301: AESEFEIPEI VATFRKNKER VNEMIKESLQ GNTIGQSLLS LMAETVSEST EIDRYIMSSW CRKPFYEVDF GSGSPVWVGY ASHTIYDNMV GVVLIDSKEG
401: DGVEAWISLP EEDMSVFVDD QELLAYAVLN PPVVA
101: DFLRNLNTDS LSGFLPTLAA GESPAAWPLL SVKVTFFGSG SGVAVSVSVS HKICDIASLV TFVKDWATTT AKGKSNSTIE FAETTIYPPP PSHMYEQFPS
201: TDSDSNITSK YVLKRFVFEP SKIAELKHKA ASESVPVPTR VEAIMSLIWR CARNSSRSNL LIPRQAVMWQ AMDIRLRIPS SVAPKDVIGN LQSGFSLKKD
301: AESEFEIPEI VATFRKNKER VNEMIKESLQ GNTIGQSLLS LMAETVSEST EIDRYIMSSW CRKPFYEVDF GSGSPVWVGY ASHTIYDNMV GVVLIDSKEG
401: DGVEAWISLP EEDMSVFVDD QELLAYAVLN PPVVA
Arabidopsis Description
BIA1BAHD acyltransferase BIA1 [Source:UniProtKB/Swiss-Prot;Acc:O23393]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.