CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34093	Soybean	extracellular	69.47	46.48
KRH34094	Soybean	extracellular	49.47	39.5
KRH68739	Soybean	extracellular	53.68	35.92
KRG92685	Soybean	extracellular	47.37	30.0
KRG96980	Soybean	extracellular	52.63	25.77
KRG96981	Soybean	extracellular	22.11	24.71
KRG96979	Soybean	extracellular	52.63	23.7

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	EMBL:ACUP02012766	InterPro:Barwin_dom	EnsemblPlantsGene:GLYMA_20G225300	GO:GO:0006950
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153
InterPro:IPR036908	UniProt:K7N521	EnsemblPlants:KRG92686	ProteinID:KRG92686	ProteinID:KRG92686.1	PFAM:PD004535
PFAM:PF00967	PRINTS:PR00602	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF71	InterPro:RlpA-like_sf
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002959CB6	:	:

Description

hypothetical protein

Coordinates

chr20:+:45958617..45959338

Molecular Weight (calculated)

10534.5 Da

IEP (calculated)

4.353

GRAVY (calculated)

0.011

Length

95 amino acids

Sequence
(BLAST)

1: MMAKLILLVC VLALASAQSA IVQFTYHLYQ PEQHNYCATW DGEANMEISK ERIVDQCKNG ALDLDVGVFQ RLDSDGSGNA QGHLIVHYEF VDCGD

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.