CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96981	Soybean	extracellular	48.59	81.18
KRH34094	Soybean	extracellular	59.15	70.59
KRH34093	Soybean	extracellular	69.72	69.72
KRG92685	Soybean	extracellular	60.56	57.33
KRG92686	Soybean	extracellular	35.92	53.68
KRG96980	Soybean	extracellular	66.2	48.45
KRG96979	Soybean	extracellular	66.2	44.55

Protein Annotations

EntrezGene:100526916	Gene3D:2.40.40.10	MapMan:35.1	EMBL:ACUP02002123	EMBL:BT091719	InterPro:Barwin_CS
InterPro:Barwin_dom	UniProt:C6T2R0	EnsemblPlantsGene:GLYMA_03G247500	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908	EnsemblPlants:KRH68739
ProteinID:KRH68739	ProteinID:KRH68739.1	PFAM:PD004535	PFAM:PF00967	PRINTS:PR00602	ScanProsite:PS00771
ScanProsite:PS00772	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF71	InterPro:RlpA-like_sf	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001B151B8	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:44428937..44430219

Molecular Weight (calculated)

15481.2 Da

IEP (calculated)

5.556

GRAVY (calculated)

-0.125

Length

142 amino acids

Sequence
(BLAST)

001: MAKVSLFVVC VVCILALASA QSATNVRATY HLYQPEQHNW DLLAVSAYCS TWDADKSLAW RSKYGWTAFC GPSGPQGQQS CGRCLRVTNT RTNAQETVRI
101: VDQCSNGGLD LDIGPFQKLD TDGNGIAQGH LIVNYDFVDC GD

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.