Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G152400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 77.46 | 67.9 |
| Solyc08g028860.1.1 | Tomato | endoplasmic reticulum, vacuole | 74.65 | 65.43 |
| KRH55079 | Soybean | cytosol, plasma membrane, plastid | 56.34 | 62.5 |
| KRH57995 | Soybean | endoplasmic reticulum, extracellular | 60.56 | 51.81 |
Protein Annotations
| Gene3D:1.20.20.10 | MapMan:35.1 | EMBL:ACUP02012035 | InterPro:ATP_synth_F0_csu | InterPro:ATP_synth_F0_csu_DDCD_BS | InterPro:ATP_synth_F0_csu_sf |
| InterPro:ATPase_proteolipid_c-like_dom | InterPro:F/V-ATP_Csub_sf | EnsemblPlantsGene:GLYMA_19G109600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015986 |
| GO:GO:0015991 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0033177 |
| GO:GO:0045263 | GO:GO:0046933 | InterPro:IPR038662 | UniProt:K7MXS9 | EnsemblPlants:KRG94790 | ProteinID:KRG94790 |
| ProteinID:KRG94790.1 | PFAM:PF00137 | PRINTS:PR00124 | ScanProsite:PS00605 | PANTHER:PTHR10031 | PANTHER:PTHR10031:SF6 |
| SUPFAM:SSF81333 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0002962905 | : | : |
Description
hypothetical protein
Coordinates
chr19:+:36339280..36339732
Molecular Weight (calculated)
7402.5 Da
IEP (calculated)
10.630
GRAVY (calculated)
1.238
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MNLIIFAAFV IAAGLTVGLA SIGPGVEGIA RQPKTKGKIR GTLLLSLVFM EALTIYGLVV ALTLLFANPF V
1: MNPLVSAASV IAAGLAVGLA SIGPGVGQGT AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM EALTIYGLVV ALALLFANPF V
Arabidopsis Description
ATPHATP synthase subunit c, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S3]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.