CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 21132161
extracellular: 22945350
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 22945350 doi

C Liao, F Hochholdinger, C Li

Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

msms PMID: 27291164 doi

X Yin, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

msms PMID: 27224218 doi

X Wang, S Komatsu

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67838	Soybean	nucleus	97.75	97.75
Bra023072.1-P	Field mustard	cytosol	89.64	89.64
Bra005261.1-P	Field mustard	cytosol	86.26	89.28
CDY33161	Canola	cytosol	86.26	89.28
CDX75031	Canola	cytosol	86.26	89.28
KRH09231	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	89.41	89.21
CDX79684	Canola	cytosol	86.04	89.04
CDX84555	Canola	cytosol	86.04	89.04
CDY65842	Canola	cytosol	85.81	88.81
KRH38728	Soybean	endoplasmic reticulum	88.96	88.76
Solyc10g085550.1.1	Tomato	cytosol, extracellular, nucleus, unclear	88.06	88.06
AT2G36530.1	Thale cress	cytosol	88.06	88.06
PGSC0003DMT400028690	Potato	cytosol, extracellular	87.61	87.61
PGSC0003DMT400007048	Potato	extracellular	87.39	87.39
Solyc09g009020.2.1	Tomato	extracellular	87.39	87.39
CDX73592	Canola	cytosol	86.04	86.04
Bra017231.1-P	Field mustard	cytosol	88.74	82.77
Bra006961.1-P	Field mustard	cytosol	38.06	77.17
CDX78136	Canola	cytosol	38.29	70.25
KRH63137	Soybean	cytosol	36.94	69.49
KRH63397	Soybean	cytosol	21.85	64.67
KRG94212	Soybean	cytosol	22.75	61.59
KRH12954	Soybean	cytosol	45.5	61.21
KRH62954	Soybean	nucleus	65.77	59.71
KRH54775	Soybean	plastid	65.54	59.63
KRH73979	Soybean	cytosol, nucleus	56.53	53.07
KRH14155	Soybean	cytosol, nucleus	55.86	52.43

Protein Annotations

KEGG:00010+4.2.1.11	KEGG:00680+4.2.1.11	Gene3D:3.20.20.120	Gene3D:3.30.390.10	MapMan:50.4.2	EMBL:ACUP02012146
InterPro:Enolase	InterPro:Enolase-like_C_sf	InterPro:Enolase-like_N	InterPro:Enolase-like_superfamily	InterPro:Enolase_C	InterPro:Enolase_CS
InterPro:Enolase_N	EnsemblPlantsGene:GLYMA_19G190900	GO:GO:0000015	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0003988	GO:GO:0004634	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016746	GO:GO:0046872	UniProt:I1NAI7	InterPro:IPR029017	InterPro:IPR036849	EnsemblPlants:KRG96124
ProteinID:KRG96124	ProteinID:KRG96124.1	HAMAP:MF_00318	PFAM:PF00113	PFAM:PF03952	PIRSF:PIRSF001400
PRINTS:PR00148	ScanProsite:PS00164	PANTHER:PTHR11902	PANTHER:PTHR11902:SF31	MetaCyc:PWY-1042	MetaCyc:PWY-1622
MetaCyc:PWY-2221	MetaCyc:PWY-5484	MetaCyc:PWY-5723	MetaCyc:PWY-6142	MetaCyc:PWY-6886	MetaCyc:PWY-6901
MetaCyc:PWY-7003	MetaCyc:PWY-7124	MetaCyc:PWY-7218	SMART:SM01192	SMART:SM01193	SUPFAM:SSF51604
SUPFAM:SSF54826	TIGRFAMs:TIGR01060	UniParc:UPI0001CAA95D	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:44841451..44846187

Molecular Weight (calculated)

47675.9 Da

IEP (calculated)

5.226

GRAVY (calculated)

-0.164

Length

444 amino acids

Sequence
(BLAST)

001: MATIVSIKAR QIFDSRGNPT VEVDLTCSDG TFARAAVPSG ASTGIYEALE LRDGGSDYLG KGVSKAVDNV NTVIGPALIG KDPTEQTAID NLMVQQLDGT
101: VNEWGWCKQK LGANAILAVS LAVCKAGASV LKIPLYKHIA NIAGNKKLVL PVPAFNVING GSHAGNKLAM QEFMVLPVGA SSFKEAMKMG VEVYHNLKSV
201: IKKKYGQDAI NVGDEGGFAP NIQENKEGLE LLKTAIAKAG YTGKVVIGMD VAASEFYKED KTYDLNFKED NNDGSQRISG DALKDLYKSF VSEYPIVSIE
301: DPFDQDDWEH YAKLTAEVGA NVQIVGDDLL VTNPKRVQKA IDTKACNALL LKVNQIGSVT ESIEAVRMSK KAGWGVMASH RSGETEDTFI ADLSVGLATG
401: QIKTGAPCRS ERLAKYNQLL RIEEELGAEA VYAGANFRTP VEPY

Best Arabidopsis Sequence Match ( AT2G36530.1 )
(BLAST)

001: MATITVVKAR QIFDSRGNPT VEVDIHTSNG IKVTAAVPSG ASTGIYEALE LRDGGSDYLG KGVSKAVGNV NNIIGPALIG KDPTQQTAID NFMVHELDGT
101: QNEWGWCKQK LGANAILAVS LAVCKAGAVV SGIPLYKHIA NLAGNPKIVL PVPAFNVING GSHAGNKLAM QEFMILPVGA ASFKEAMKMG VEVYHHLKSV
201: IKKKYGQDAT NVGDEGGFAP NIQENKEGLE LLKTAIEKAG YTGKVVIGMD VAASEFYSED KTYDLNFKEE NNNGSQKISG DALKDLYKSF VAEYPIVSIE
301: DPFDQDDWEH YAKMTTECGT EVQIVGDDLL VTNPKRVAKA IAEKSCNALL LKVNQIGSVT ESIEAVKMSK KAGWGVMTSH RSGETEDTFI ADLAVGLSTG
401: QIKTGAPCRS ERLAKYNQLL RIEEELGSEA IYAGVNFRKP VEPY

Arabidopsis Description

ENO2LOS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VT47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.