Factsheet for Solyc10g085550.1.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, extracellular, nucleus, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

unclear: 26455813
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028690	Potato	cytosol, extracellular	98.42	98.42
Solyc09g009020.2.1	Tomato	extracellular	94.59	94.59
Bra023072.1-P	Field mustard	cytosol	89.86	89.86
Bra005261.1-P	Field mustard	cytosol	86.49	89.51
CDX75031	Canola	cytosol	86.49	89.51
CDY65842	Canola	cytosol	86.49	89.51
CDX79684	Canola	cytosol	86.49	89.51
CDX84555	Canola	cytosol	86.49	89.51
CDY33161	Canola	cytosol	86.49	89.51
KRH09231	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	89.64	89.44
AT2G36530.1	Thale cress	cytosol	89.41	89.41
KRH38728	Soybean	endoplasmic reticulum	89.41	89.21
TraesCS5A01G014500.1	Wheat	cytosol, golgi, unclear	88.96	88.56
VIT_16s0022g01770.t01	Wine grape	extracellular	88.74	88.54
TraesCS5D01G020100.1	Wheat	cytosol	88.74	88.34
TraesCS5D01G019800.1	Wheat	cytosol, golgi, plasma membrane	88.74	88.34
TraesCS5B01G012300.2	Wheat	cytosol, unclear	88.74	88.34
Zm00001d030373_P003	Maize	plasma membrane, plastid	88.74	88.34
TraesCS5A01G014400.2	Wheat	cytosol, unclear	88.51	88.12
Os10t0167300-01	Rice	extracellular	88.51	88.12
VIT_08s0007g03960.t01	Wine grape	cytosol	86.49	88.07
KRG96124	Soybean	nucleus	88.06	88.06
Os03t0248600-01	Rice	plasma membrane	88.06	87.87
KRH67838	Soybean	nucleus	87.84	87.84
TraesCS5B01G012100.3	Wheat	golgi	88.06	87.67
Zm00001d045431_P001	Maize	plasma membrane	87.84	87.44
Os06t0136600-01	Rice	extracellular	87.84	87.44
GSMUA_Achr5P18810_001	Banana	cytosol, plasma membrane	87.61	87.42
KXG19229	Sorghum	cytosol	87.39	87.0
OQU75769	Sorghum	cytosol	87.16	86.77
GSMUA_Achr11P...	Banana	cytosol	86.94	86.74
TraesCS7D01G071200.1	Wheat	golgi	87.16	86.38
TraesCS7A01G075600.1	Wheat	cytosol	87.61	85.68
CDX73592	Canola	cytosol	85.36	85.36
GSMUA_Achr1P08270_001	Banana	cytosol	82.66	83.6
Bra017231.1-P	Field mustard	cytosol	89.19	83.19
HORVU7Hr1G017640.1	Barley	extracellular	86.71	80.04
HORVU5Hr1G118660.1	Barley	cytosol	21.17	78.99
HORVU6Hr1G016800.2	Barley	cytosol	43.02	77.64
HORVU5Hr1G002040.4	Barley	mitochondrion	85.81	77.13
Bra006961.1-P	Field mustard	cytosol	37.61	76.26
Zm00001d036086_P002	Maize	cytosol	58.56	74.5
HORVU2Hr1G103860.2	Barley	cytosol	39.19	71.9
TraesCS4A01G373800.1	Wheat	cytosol, plastid	63.96	70.47
CDX78136	Canola	cytosol	37.39	68.59
KRH63397	Soybean	cytosol	21.85	64.67
Solyc10g045050.1.1	Tomato	cytosol	14.86	61.68
Solyc03g114500.2.1	Tomato	plastid	65.32	59.43
Solyc06g076650.2.1	Tomato	cytosol, nucleus, unclear	54.05	50.74

Protein Annotations

KEGG:00010+4.2.1.11	KEGG:00680+4.2.1.11	Gene3D:3.20.20.120	Gene3D:3.30.390.10	MapMan:50.4.2	InterPro:Enolase
InterPro:Enolase-like_C_sf	InterPro:Enolase-like_N	InterPro:Enolase-like_superfamily	InterPro:Enolase_C	InterPro:Enolase_CS	InterPro:Enolase_N
GO:GO:0000015	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004634	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	GO:GO:0046872	InterPro:IPR029017	InterPro:IPR036849
UniProt:K4D3Y9	HAMAP:MF_00318	PFAM:PF00113	PFAM:PF03952	PIRSF:PIRSF001400	PRINTS:PR00148
ScanProsite:PS00164	PANTHER:PTHR11902	PANTHER:PTHR11902:SF31	SMART:SM01192	SMART:SM01193	SUPFAM:SSF51604
SUPFAM:SSF54826	EnsemblPlantsGene:Solyc10g085550.1	EnsemblPlants:Solyc10g085550.1.1	TIGRFAMs:TIGR01060	UniParc:UPI000276A8C6	:

Description

No Description!

Coordinates

chr10:+:64671483..64676091

Molecular Weight (calculated)

47953.2 Da

IEP (calculated)

6.282

GRAVY (calculated)

-0.259

Length

444 amino acids

Sequence
(BLAST)

001: MATIKSIKAR QIFDSRGNPT VEVDVYLSNG LWERAAVPSG ASTGIYEALE LRDGGSEYLG KGVSKAVNNV NSIIGPALIG KDPTDQTGLD NYMVHQLDGT
101: QNEWGWCKQK LGANAILAVS LAVCKAGAAV KKIPLYKHIA NLAGNKKLVL PVPAFNVING GSHAGNKLAM QEFMILPVGA SSFKEAMKMG CEVYHHLKAV
201: IKKKYGQDAT NVGDEGGFAP NIQENKEGLE LLKTAIEKAG YTGKVVIGMD VAASEFYGKD KTYDLNFKEE NNNGSQKISG DQLKDLYKSF VSEYPIVSIE
301: DPFDQDDWET YAKLTAEIGQ KVQIVGDDLL VTNPKRVAKA ISEKTCNALL LKVNQIGSVT ESIEAVKMSK QAGWGVMTSH RSGETEDTFI ADLAVGLSTG
401: QIKTGAPCRS ERLAKYNQLL RIEEELGSDA VYAGASFRAP VEPY

Best Arabidopsis Sequence Match ( AT2G36530.1 )
(BLAST)

001: MATITVVKAR QIFDSRGNPT VEVDIHTSNG IKVTAAVPSG ASTGIYEALE LRDGGSDYLG KGVSKAVGNV NNIIGPALIG KDPTQQTAID NFMVHELDGT
101: QNEWGWCKQK LGANAILAVS LAVCKAGAVV SGIPLYKHIA NLAGNPKIVL PVPAFNVING GSHAGNKLAM QEFMILPVGA ASFKEAMKMG VEVYHHLKSV
201: IKKKYGQDAT NVGDEGGFAP NIQENKEGLE LLKTAIEKAG YTGKVVIGMD VAASEFYSED KTYDLNFKEE NNNGSQKISG DALKDLYKSF VAEYPIVSIE
301: DPFDQDDWEH YAKMTTECGT EVQIVGDDLL VTNPKRVAKA IAEKSCNALL LKVNQIGSVT ESIEAVKMSK KAGWGVMTSH RSGETEDTFI ADLAVGLSTG
401: QIKTGAPCRS ERLAKYNQLL RIEEELGSEA IYAGVNFRKP VEPY

Arabidopsis Description

ENO2LOS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VT47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.