Factsheet for Solyc06g076650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, nucleus, cytosol

Predictor Summary:

cytosol 5
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

unclear: 26455813
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078017	Potato	cytosol	98.52	98.52
VIT_06s0004g05900.t01	Wine grape	cytosol	83.3	83.47
AT2G29560.1	Thale cress	cytosol	81.82	81.47
Bra018378.1-P	Field mustard	cytosol	81.61	81.26
KRH73979	Soybean	cytosol, nucleus	81.18	81.18
KRH14155	Soybean	cytosol, nucleus	80.97	80.97
CDY53365	Canola	cytosol	81.18	80.67
CDY45453	Canola	cytosol	80.97	80.46
GSMUA_Achr6P15120_001	Banana	cytosol	76.11	75.95
TraesCS4B01G212500.1	Wheat	cytosol	65.54	65.13
TraesCS4D01G213500.1	Wheat	cytosol	65.12	64.71
HORVU4Hr1G060840.5	Barley	cytosol, extracellular	64.9	64.5
TraesCS4A01G091900.1	Wheat	cytosol	64.9	64.5
EER92500	Sorghum	cytosol	64.9	64.36
Os03t0266200-01	Rice	cytosol, plasma membrane, plastid	34.25	63.28
Zm00001d047843_P002	Maize	cytosol, plastid	63.85	63.05
VIT_11s0016g01570.t01	Wine grape	cytosol	9.51	60.81
Zm00001d028554_P003	Maize	cytosol	43.97	59.09
Solyc09g009020.2.1	Tomato	extracellular	51.16	54.5
Solyc10g085550.1.1	Tomato	cytosol, extracellular, nucleus, unclear	50.74	54.05
Solyc10g045050.1.1	Tomato	cytosol	11.84	52.34
Solyc03g114500.2.1	Tomato	plastid	49.68	48.16
TraesCS3D01G331500.1	Wheat	cytosol	9.73	40.35
TraesCS4A01G060000.1	Wheat	cytosol	9.3	38.6

Protein Annotations

KEGG:00010+4.2.1.11	KEGG:00680+4.2.1.11	MapMan:2.1.1.7	Gene3D:3.20.20.120	Gene3D:3.30.390.10	InterPro:Enolase
InterPro:Enolase-like_C_sf	InterPro:Enolase-like_N	InterPro:Enolase_C	InterPro:Enolase_CS	InterPro:Enolase_N	GO:GO:0000015
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004634	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	InterPro:IPR029017	InterPro:IPR036849	UniProt:K4CA25	HAMAP:MF_00318
PFAM:PF00113	PFAM:PF03952	PIRSF:PIRSF001400	PRINTS:PR00148	ScanProsite:PS00164	PANTHER:PTHR11902
PANTHER:PTHR11902:SF13	SMART:SM01192	SMART:SM01193	SUPFAM:SSF51604	SUPFAM:SSF54826	EnsemblPlantsGene:Solyc06g076650.2
EnsemblPlants:Solyc06g076650.2.1	TIGRFAMs:TIGR01060	UniParc:UPI00027672DD	:	:	:

Description

Cytosolic enolase 3 [Source:Projected from Arabidopsis thaliana (AT2G29560) UniProtKB/Swiss-Prot;Acc:Q9ZW34]

Coordinates

chr6:+:47601530..47610511

Molecular Weight (calculated)

51428.5 Da

IEP (calculated)

5.679

GRAVY (calculated)

-0.207

Length

473 amino acids

Sequence
(BLAST)

001: MSVQEYLDKH LLSRRIEDAV NAAVRAKTSD PVLFISNHMR KAVPSVITKV KARQILDSRG IPTVEVDLHT NKGLFRASAP SGASSGMYEA IELRDGEKGT
101: YLGNSVNRAV KNINEKISVA LVGMDPTLQS QIDQVMIDLD KTENKSELGA NAILAVSIAA CKAGAAEKEV SLHKHIADLS GQTSPLLPVP VFTLISGGKH
201: GGNNLAIQEI MILPVGSNTF EEALQMGSET YHHLKAVITE TYGAHGCNVG EDGGFTPNIS SLRDGLDLVQ KAIGRTGYNE KIKIAIGVAA TEFCIGTKYD
301: LDFKTPNKSG QNFKSGQDMI DMYKELCADY PIVSIEDPFD KEDWEHVKYF SSLGICQVVG GDLIMSNPKR IERAIQENSC NALLLKVNQI GTVTEAIEVV
401: KMAKDAQWGV VISQRLGETE DSFISDLSVG LATSQIKAGA PCRGERLAKY NQLLRIEEEL GDQAVYTGEK WRN

Best Arabidopsis Sequence Match ( AT2G29560.1 )
(BLAST)

001: MSVQEYLDKH MLSRKIEDAV NAAVRAKTSD PVLFIANHLK KAVSSVITKV KARQILDSRG IPTVEVDLHT NKGVFRASVP SGDSSGTYEA IELRDGDKGM
101: YLGNSVAKAV KNINEKISEA LIGMDPKLQG QIDQAMIDLD KTEKKSELGA NAILAVSIAA CKAGAAEKEV PLCKHLSDLS GRANMVLPVP AFTVLSGGKH
201: ASNTFAIQEI MILPIGASRF EEALQWGSET YHHLKAVISE KNGGLGCNVG EDGGLAPDIS SLKEGLELVK EAINRTGYND KIKIAIDIAA TNFCLGTKYD
301: LDIKSPNKSG QNFKSAEDMI DMYKEICNDY PIVSIEDPFD KEDWEHTKYF SSLGICQVVG DDLLMSNSKR VERAIQESSC NALLLKVNQI GTVTEAIEVV
401: KMARDAQWGV VTSHRCGETE DSFISDLSVG LATGVIKAGA PCRGERTMKY NQLLRIEEEL GDQAVYAGED WKLSL

Arabidopsis Description

ENO3Cytosolic enolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.