CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14155	Soybean	cytosol, nucleus	98.31	98.31
VIT_06s0004g05900.t01	Wine grape	cytosol	85.62	85.81
Bra018378.1-P	Field mustard	cytosol	82.45	82.11
CDY53365	Canola	cytosol	82.45	81.93
CDY45453	Canola	cytosol	82.24	81.72
AT2G29560.1	Thale cress	cytosol	82.03	81.68
Solyc06g076650.2.1	Tomato	cytosol, nucleus, unclear	81.18	81.18
PGSC0003DMT400078017	Potato	cytosol	80.76	80.76
GSMUA_Achr6P15120_001	Banana	cytosol	77.38	77.22
HORVU4Hr1G060840.5	Barley	cytosol, extracellular	67.02	66.6
TraesCS4D01G213500.1	Wheat	cytosol	67.02	66.6
EER92500	Sorghum	cytosol	66.81	66.25
TraesCS4B01G212500.1	Wheat	cytosol	66.6	66.18
TraesCS4A01G091900.1	Wheat	cytosol	66.38	65.97
Os03t0266200-01	Rice	cytosol, plasma membrane, plastid	35.31	65.23
Zm00001d047843_P002	Maize	cytosol, plastid	65.96	65.14
VIT_11s0016g01570.t01	Wine grape	cytosol	9.94	63.51
Zm00001d028554_P003	Maize	cytosol	45.67	61.36
KRH67838	Soybean	nucleus	53.07	56.53
KRG96124	Soybean	nucleus	53.07	56.53
KRH38728	Soybean	endoplasmic reticulum	53.07	56.4
KRH09231	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	53.07	56.4
KRH63137	Soybean	cytosol	26.0	52.12
KRG94212	Soybean	cytosol	17.55	50.61
KRH12954	Soybean	cytosol	33.19	47.58
KRH54775	Soybean	plastid	48.84	47.34
KRH62954	Soybean	nucleus	48.84	47.24
TraesCS3D01G331500.1	Wheat	cytosol	9.73	40.35
TraesCS4A01G060000.1	Wheat	cytosol	9.51	39.47
KRH63397	Soybean	cytosol	11.63	36.67

Protein Annotations

KEGG:00010+4.2.1.11	KEGG:00680+4.2.1.11	EntrezGene:100789125	MapMan:2.1.1.7	Gene3D:3.20.20.120	Gene3D:3.30.390.10
EMBL:ACUP02001292	InterPro:Enolase	InterPro:Enolase-like_C_sf	InterPro:Enolase-like_N	InterPro:Enolase-like_superfamily	InterPro:Enolase_C
InterPro:Enolase_N	EnsemblPlantsGene:GLYMA_02G304200	GO:GO:0000015	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004634	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0046872	UniProt:I1JJN9
InterPro:IPR029017	InterPro:IPR036849	EnsemblPlants:KRH73979	ProteinID:KRH73979	ProteinID:KRH73979.1	HAMAP:MF_00318
PFAM:PF00113	PFAM:PF03952	PIRSF:PIRSF001400	PRINTS:PR00148	PANTHER:PTHR11902	PANTHER:PTHR11902:SF13
MetaCyc:PWY-1042	MetaCyc:PWY-1622	MetaCyc:PWY-2221	MetaCyc:PWY-5484	MetaCyc:PWY-5723	MetaCyc:PWY-6142
MetaCyc:PWY-6886	MetaCyc:PWY-6901	MetaCyc:PWY-7003	MetaCyc:PWY-7124	MetaCyc:PWY-7218	SMART:SM01192
SMART:SM01193	SUPFAM:SSF51604	SUPFAM:SSF54826	TIGRFAMs:TIGR01060	UniParc:UPI0001CAB9D7	:

Description

hypothetical protein

Coordinates

chr2:+:47932634..47939200

Molecular Weight (calculated)

51518.7 Da

IEP (calculated)

5.511

GRAVY (calculated)

-0.183

Length

473 amino acids

Sequence
(BLAST)

001: MSVQDYLDKH MLSRKLEDAV NAAVRAKTSD PVLFISNHMR KAVQSVITKI KARQILDSRG IPTVEVDLHT NKGVFRASVP SGNSTSMYEA VELRDGDKGV
101: YLGNGVAKAV KNINDKISEA LIGMDPTLQS QIDQAMIDLD KTEKKGELGA NAILAVSIAA CKAGAAEKEV PLYKHIADLS GKTSPTLPVP AFTVISGGKH
201: AGSNLAIQEI MILPIGASKF EEALRMGTET YHHLKAVITE KYGAHNCNVG EDGGFAPNIS SFREALDLVK EAISRAGYDE KIKIALDVAA TDFCIGKRYD
301: LDFQSPQKSG QNFKSAEDMI DLYKELCSEY PIVSIEDPFD KEDWEHIKHI SSLGICQVVG DDLLMSNAKR IERAITESAC NALLLKVNQV GTITEVIEVV
401: KLAKEAHWGV VTSHRCGETI DSFIADLSVG LASGVIKAGA PCRGERLEKY NQLLRIEEEL GDQAVYAGED WRQ

Best Arabidopsis Sequence Match ( AT2G29560.1 )
(BLAST)

001: MSVQEYLDKH MLSRKIEDAV NAAVRAKTSD PVLFIANHLK KAVSSVITKV KARQILDSRG IPTVEVDLHT NKGVFRASVP SGDSSGTYEA IELRDGDKGM
101: YLGNSVAKAV KNINEKISEA LIGMDPKLQG QIDQAMIDLD KTEKKSELGA NAILAVSIAA CKAGAAEKEV PLCKHLSDLS GRANMVLPVP AFTVLSGGKH
201: ASNTFAIQEI MILPIGASRF EEALQWGSET YHHLKAVISE KNGGLGCNVG EDGGLAPDIS SLKEGLELVK EAINRTGYND KIKIAIDIAA TNFCLGTKYD
301: LDIKSPNKSG QNFKSAEDMI DMYKEICNDY PIVSIEDPFD KEDWEHTKYF SSLGICQVVG DDLLMSNSKR VERAIQESSC NALLLKVNQI GTVTEAIEVV
401: KMARDAQWGV VTSHRCGETE DSFISDLSVG LATGVIKAGA PCRGERTMKY NQLLRIEEEL GDQAVYAGED WKLSL

Arabidopsis Description

ENO3Cytosolic enolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.