CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50705	Soybean	nucleus	89.2	90.79
KRH36956	Soybean	nucleus	52.26	62.84
KRH11917	Soybean	nucleus	55.28	61.8
KRH15622	Soybean	nucleus	10.55	61.76
VIT_05s0077g00730.t01	Wine grape	nucleus	41.46	53.4
KRG96545	Soybean	nucleus	30.9	42.41
KRH69197	Soybean	nucleus	33.92	42.19
KRH68280	Soybean	nucleus	30.4	42.16
KRH31775	Soybean	nucleus	34.17	42.11
KRH41119	Soybean	nucleus	14.82	40.14
KRH06569	Soybean	nucleus	18.59	37.95
KRH61557	Soybean	nucleus	15.08	37.27
KRH05396	Soybean	nucleus	15.33	37.2
KRH75010	Soybean	nucleus	27.39	36.7
KRH70870	Soybean	nucleus	26.88	36.52
GSMUA_Achr8P10740_001	Banana	nucleus	28.39	36.1
KRH52231	Soybean	nucleus	14.57	36.02
KRG94564	Soybean	nucleus	16.83	35.64
KRH54160	Soybean	nucleus	14.32	35.62
GSMUA_AchrUn_...	Banana	nucleus	26.88	35.55
KRH00862	Soybean	cytosol	16.58	34.38
KRH14487	Soybean	nucleus	28.89	34.33
KRH40372	Soybean	cytosol	16.33	33.85
KRH58435	Soybean	nucleus	29.9	33.24
KRH73639	Soybean	nucleus	28.14	33.23
KRH42308	Soybean	nucleus	30.4	32.61
KRH48843	Soybean	nucleus	18.84	31.65
KRH66475	Soybean	nucleus	18.84	31.51
KRH40189	Soybean	nucleus	18.59	31.09
KRH59476	Soybean	nucleus	16.83	31.02
KRH64133	Soybean	nucleus	17.84	30.34
KRH53810	Soybean	nucleus	17.84	30.08
KRH43323	Soybean	nucleus	13.82	29.89
KRH43340	Soybean	nucleus	17.34	29.36
KRH59457	Soybean	nucleus	13.57	28.72
KRH53804	Soybean	nucleus	13.32	27.04
KRH64140	Soybean	nucleus	13.07	26.53

Protein Annotations

EntrezGene:100808190	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02010303	EnsemblPlantsGene:GLYMA_17G035400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1MRS9	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRH02380	ProteinID:KRH02380	ProteinID:KRH02380.1	ProteinID:KRH02381.1	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF80	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000233EF55
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:2596220..2599345

Molecular Weight (calculated)

43562.9 Da

IEP (calculated)

5.969

GRAVY (calculated)

-0.840

Length

398 amino acids

Sequence
(BLAST)

001: MEEKREKEKN SKSSSSTMAN SVAFSDEIPN MSMSFPFSPA FSSSIFDMMP PPPPSSSHDP KAPNFANSFM DLLAVPADYY TPSLFDWSQN TAPTSAPPPS
101: TTQINHPLPS PASSNVPDGS EVLNTPASPN SSSISSSSNE AAAATTANKT TGNDNEEEED ETAIDATAGR EEEDHQDQDK TKKQLKPKKK NQKKQREPRF
201: AFMTKSEVDH LDDGYRWRKY GQKAVKNSPH PRSYYRCTTA TCGVKKRVER SSEDPTVVVT TYEGQHTHPC PATSRASFGF MHSEASGFGP TSGLGSAHFM
301: LQQQQQFRDQ AQAQAAMLYN STSSSLSLPL NVVNSASCVN NSYANTSSLS GFLQGQENHQ RGFVPSRVVA PHIFLRDNGL LQDIVPTQMG NEENEDRV

Best Arabidopsis Sequence Match ( AT2G47260.1 )
(BLAST)

001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE

Arabidopsis Description

WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.