CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02380	Soybean	nucleus	90.79	89.2
KRH36956	Soybean	nucleus	53.2	62.84
KRH15622	Soybean	nucleus	10.74	61.76
KRH11917	Soybean	nucleus	55.24	60.67
VIT_05s0077g00730.t01	Wine grape	nucleus	42.2	53.4
KRH68280	Soybean	nucleus	31.46	42.86
KRH69197	Soybean	nucleus	35.04	42.81
KRG96545	Soybean	nucleus	31.71	42.76
KRH31775	Soybean	nucleus	35.29	42.72
KRH41119	Soybean	nucleus	14.83	39.46
KRH06569	Soybean	nucleus	19.18	38.46
GSMUA_Achr8P10740_001	Banana	nucleus	29.92	37.38
KRH61557	Soybean	nucleus	15.35	37.27
GSMUA_AchrUn_...	Banana	nucleus	28.39	36.88
KRH05396	Soybean	nucleus	15.35	36.59
KRH70870	Soybean	nucleus	27.37	36.52
KRH75010	Soybean	nucleus	27.62	36.36
KRH52231	Soybean	nucleus	14.83	36.02
KRH00862	Soybean	cytosol	17.65	35.94
KRG94564	Soybean	nucleus	17.14	35.64
KRH54160	Soybean	nucleus	14.32	35.0
KRH40372	Soybean	cytosol	17.14	34.9
KRH14487	Soybean	nucleus	29.41	34.33
KRH73639	Soybean	nucleus	28.64	33.23
KRH58435	Soybean	nucleus	30.18	32.96
KRH42308	Soybean	nucleus	30.95	32.61
KRH48843	Soybean	nucleus	19.44	32.07
KRH66475	Soybean	nucleus	19.44	31.93
KRH40189	Soybean	nucleus	19.18	31.51
KRH59476	Soybean	nucleus	17.39	31.48
KRH64133	Soybean	nucleus	18.16	30.34
KRH53810	Soybean	nucleus	18.16	30.08
KRH43323	Soybean	nucleus	14.07	29.89
KRH43340	Soybean	nucleus	17.9	29.79
KRH59457	Soybean	nucleus	13.81	28.72
KRH53804	Soybean	nucleus	13.3	26.53
KRH64140	Soybean	nucleus	13.04	26.02

Protein Annotations

EntrezGene:100788697	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02004710	EnsemblPlantsGene:GLYMA_07G238000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1KMP6	InterPro:IPR003657
InterPro:IPR036576	ProteinID:KRH50702.1	ProteinID:KRH50703.1	ProteinID:KRH50704.1	EnsemblPlants:KRH50705	ProteinID:KRH50705
ProteinID:KRH50705.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF80	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002338BEB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:41925996..41929017

Molecular Weight (calculated)

42486.9 Da

IEP (calculated)

6.289

GRAVY (calculated)

-0.764

Length

391 amino acids

Sequence
(BLAST)

001: MEEKREKEGN SKSSSTMANS VAFSDEIPNM SMSTSFPFSP AFSSIFDMMP PPPPSSSHDP KAPNNFAGFM DLLAVPADYY APSLFDWPQN TTATSAPPPL
101: TAQINHPLPS PASSNVPDGS EVLNTPASPN YSSISSSSNE AAAAAAANKA TGNDNDVDDE TTIDAAAGRG EEDQDQDKTK KQLKPKKKNQ KKQREPRFAF
201: MTKSEVDHLD DGYRWRKYGQ KAVKNSPHPR SYYRCTTATC GVKKRVERSS EDPTVVVTTY EGQHTHPCPA TSRASLGFMH SEASGGFGPT SGLGSAHFML
301: PQQQQFRDQA QAAMLLYNSN SSSLSLPLNV VNSASCVNNS YPNTSSLSGF LQGQENHQRS VLAPHAFLRD NGLLQDIVPT HMRNEESEDR V

Best Arabidopsis Sequence Match ( AT5G49520.1 )
(BLAST)

001: MEKKKEEDHH HQQQQQQQKE IKNTETKIEQ EQEQEQKQEI SQASSSSNMA NLVTSSDHHP LELAGNLSSI FDTSSLPFPY SYFEDHSSNN PNSFLDLLRQ
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK

Arabidopsis Description

WRKY48Probable WRKY transcription factor 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.