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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH36764 Soybean nucleus 94.35 94.08
KRH36765 Soybean endoplasmic reticulum 78.53 80.12
KRH11763 Soybean extracellular 78.25 79.37
KRH36770 Soybean extracellular 76.27 77.36
KRH11766 Soybean extracellular 56.21 76.25
KRH11767 Soybean extracellular, golgi 68.93 68.16
KRH11761 Soybean cytosol 37.29 67.69
KRH36769 Soybean endoplasmic reticulum 66.67 67.43
KRH11765 Soybean extracellular 65.54 66.29
KRH36763 Soybean extracellular 65.82 66.19
KRH36768 Soybean extracellular 64.41 65.71
KRG95399 Soybean extracellular 53.11 56.8
KRH71834 Soybean extracellular 53.11 56.8
KRH11764 Soybean extracellular 46.61 56.31
KRH38084 Soybean extracellular 51.98 55.59
VIT_06s0004g01180.t01 Wine grape extracellular 52.82 54.84
KRH67078 Soybean plastid 53.39 52.79
KRH02680 Soybean extracellular, vacuole 46.33 49.4
KRH37428 Soybean extracellular 43.5 49.2
KRH19217 Soybean extracellular, vacuole 45.76 49.09
KRH02678 Soybean extracellular, vacuole 45.48 48.64
KRH12435 Soybean extracellular 34.75 47.67
KRH76737 Soybean extracellular, mitochondrion 44.35 47.43
KRH08162 Soybean extracellular 44.35 47.43
KRH76956 Soybean extracellular 43.79 47.4
KRH28727 Soybean extracellular, nucleus 44.07 47.13
KRH28504 Soybean extracellular, plasma membrane 43.5 47.09
KRH69854 Soybean extracellular, nucleus 43.5 46.53
KRH71183 Soybean extracellular, golgi, vacuole 42.37 45.18
KRH04663 Soybean cytosol 32.49 44.57
KRH77230 Soybean extracellular 40.96 43.67
KRH50238 Soybean extracellular 41.53 43.49
KRH71067 Soybean extracellular 40.96 43.03
KRH36427 Soybean extracellular, golgi 41.53 42.98
KRH71182 Soybean extracellular 40.96 42.9
KRH05871 Soybean extracellular, golgi 41.53 42.86
KRH15137 Soybean extracellular 41.53 42.73
KRH27544 Soybean extracellular 40.68 42.48
KRH08164 Soybean endoplasmic reticulum, plasma membrane 42.09 42.45
KRH02395 Soybean extracellular 36.44 40.06
KRH50693 Soybean extracellular 36.16 38.55
KRG89577 Soybean cytosol 24.29 37.07
KRH75211 Soybean cytosol 39.83 24.87
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1UniProt:A0A0R4J5A2EMBL:ACUP02009234
EnsemblPlantsGene:GLYMA_15G128700GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114
GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016EnsemblPlants:KRH11762ProteinID:KRH11762
ProteinID:KRH11762.1PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435PFscan:PS50873
PANTHER:PTHR31388PANTHER:PTHR31388:SF97MetaCyc:PWY-5461MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824
MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidase
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000189D1F2SEG:seg::
Description
hypothetical protein
Coordinates
chr15:+:10263477..10266711
Molecular Weight (calculated)
38574.2 Da
IEP (calculated)
7.103
GRAVY (calculated)
-0.051
Length
354 amino acids
Sequence
(BLAST)
001: MKSFHLTVTA LCCVVVVLGV LPLSLDAQLD PSFYRDTCPR VHSIVREVVR NVSKKDPRML ASLIRLHFHD CFVQGCDASV LLNNTATIES EQQALPNNNS
101: LRGLDVVNDI KTAVEKACPG VVSCADILTL ASEISSVLGG GPDWKVPLGR RDSLTANRNL ANQNLPAPFF NLSRLKSAFA VQGLDTTDLV ALSGAHTFGR
201: AHCNFILDRL YNFSGTGKPD PTLDTTYLQQ LRQICPNGGP NNLVNFDPVT PDKIDRVYFS NLQVKKGLLQ SDQELFSTPG ADTIPIVNRF SSDQKVFFDA
301: FEASMIKMGN IGVLTGKKGE IRKHCNFVNK KSVEVDIASV ASEESSTEGM VTSI
Best Arabidopsis Sequence Match ( AT2G38380.1 )
(BLAST)
001: MGFSPSFSCS AIGALILGCL LLQASNSNAQ LRPDFYFGTC PFVFDIIGNI IVDELQTDPR IAASLLRLHF HDCFVRGCDA SILLDNSTSF RTEKDAAPNA
101: NSARGFNVID RMKVALERAC PGRVSCADIL TIASQISVLL SGGPWWPVPL GRRDSVEAFF ALANTALPSP FFNLTQLKTA FADVGLNRTS DLVALSGGHT
201: FGRAQCQFVT PRLYNFNGTN SPDPSLNPTY LVELRRLCPQ NGNGTVLVNF DVVTPDAFDS QYYTNLRNGK GLIQSDQELF STPGADTIPL VNQYSSDMSV
301: FFRAFIDAMI RMGNLRPLTG TQGEIRQNCR VVNPRIRVVE NDDGVVSSI
Arabidopsis Description
PER22Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178VXE4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.