Factsheet for VIT_06s0004g01180.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g06650.t01	Wine grape	extracellular, vacuole	59.82	60.9
VIT_06s0004g01190.t01	Wine grape	extracellular	53.96	60.33
KRH36765	Soybean	endoplasmic reticulum	59.53	58.5
KRH11763	Soybean	extracellular	59.53	58.17
KRH11761	Soybean	cytosol	32.55	56.92
KRH36763	Soybean	extracellular	58.06	56.25
KRH36769	Soybean	endoplasmic reticulum	56.01	54.57
VIT_06s0004g01240.t01	Wine grape	extracellular	43.4	54.41
KRH11765	Soybean	extracellular	55.72	54.29
KRH36764	Soybean	nucleus	55.72	53.52
KRH36770	Soybean	extracellular	54.25	53.01
KRH11762	Soybean	endoplasmic reticulum	54.84	52.82
KRH36768	Soybean	extracellular	53.67	52.74
KRH11767	Soybean	extracellular, golgi	55.13	52.51
KRH11766	Soybean	extracellular	40.18	52.49
VIT_05s0077g00720.t01	Wine grape	extracellular	40.18	50.18
VIT_04s0023g02570.t01	Wine grape	extracellular	47.21	48.49
VIT_02s0012g00540.t01	Wine grape	extracellular	43.11	44.28
VIT_00s0567g00020.t01	Wine grape	extracellular	41.94	43.73
VIT_07s0191g00050.t01	Wine grape	extracellular	41.64	43.56
KRH11764	Soybean	extracellular	37.24	43.34
VIT_01s0010g01090.t01	Wine grape	extracellular, vacuole	41.94	42.18
VIT_18s0001g13110.t01	Wine grape	extracellular	42.52	42.03
VIT_03s0063g01040.t01	Wine grape	extracellular	39.88	41.34

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100260291	wikigene:100260291	MapMan:35.1
ProteinID:CCB43774	ProteinID:CCB43774.1	UniProt:F6GUF3	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	EntrezGene:LOC100260291	wikigene:LOC100260291	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF22	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TIGR:TC70377
UniParc:UPI00015C7B31	ArrayExpress:VIT_06s0004g01180	EnsemblPlantsGene:VIT_06s0004g01180	EnsemblPlants:VIT_06s0004g01180.t01	RefSeq:XP_002285652	RefSeq:XP_002285652.2
SEG:seg	:	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6GUF3]

Coordinates

chr6:-:1261685..1263352

Molecular Weight (calculated)

36295.4 Da

IEP (calculated)

4.096

GRAVY (calculated)

-0.002

Length

341 amino acids

Sequence
(BLAST)

001: MCSQVVGLLI LGVFLLGGSP SYGQLSPTYY DDTCPNASSI VRGVIQEAFI SDVRIGASLI RLHFHDCFVN GCDGSLLLDN TETIVSEKDA IPNANSTRGF
101: EVVDSIKTAL ESSCQGIVSC ADILAIAAEA SVNMSGGPSW TVLLGRRDSR IANQSGANTA LPNPRQNITT LKAVFEAVGL NTTTDLVALS GAHTFGRAAC
201: RFFSDRIYNF SGTESPDPSL NSSYLETLSA LCPQDGDGTV LADLDPTTPD GFDKNYFSNL QENRGLLQSD QELFSTTGSD TIDIVNLFAS NETAFFESFV
301: ESMIRMGNIS PLTGTEGEIR LDCRKVNNDS SGSADVLVSS I

Best Arabidopsis Sequence Match ( AT5G06720.1 )
(BLAST)

001: MAVTNLPTCD GLFIISLIVI VSSIFGTSSA QLNATFYSGT CPNASAIVRS TIQQALQSDT RIGASLIRLH FHDCFVNGCD ASILLDDTGS IQSEKNAGPN
101: VNSARGFNVV DNIKTALENA CPGVVSCSDV LALASEASVS LAGGPSWTVL LGRRDSLTAN LAGANSSIPS PIESLSNITF KFSAVGLNTN DLVALSGAHT
201: FGRARCGVFN NRLFNFSGTG NPDPTLNSTL LSTLQQLCPQ NGSASTITNL DLSTPDAFDN NYFANLQSND GLLQSDQELF STTGSSTIAI VTSFASNQTL
301: FFQAFAQSMI NMGNISPLTG SNGEIRLDCK KVNGS

Arabidopsis Description

PER53Peroxidase 53 [Source:UniProtKB/Swiss-Prot;Acc:Q42578]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.