Factsheet for VIT_06s0004g01240.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19217	Soybean	extracellular, vacuole	79.41	65.45
KRH02680	Soybean	extracellular, vacuole	79.41	65.06
Bra002271.1-P	Field mustard	cytosol	66.54	64.64
KRH02678	Soybean	extracellular, vacuole	78.31	64.35
GSMUA_Achr2P21710_001	Banana	extracellular	66.54	60.13
KRH12435	Soybean	extracellular	56.62	59.69
GSMUA_Achr1P22040_001	Banana	extracellular	66.54	59.15
PGSC0003DMT400061826	Potato	extracellular	70.59	58.18
Solyc01g015080.2.1	Tomato	extracellular	70.22	57.88
CDY42313	Canola	extracellular	68.75	57.72
CDY44951	Canola	extracellular	68.38	57.41
Bra020072.1-P	Field mustard	extracellular	68.38	57.41
GSMUA_Achr6P11430_001	Banana	extracellular	59.19	56.89
KRH37428	Soybean	extracellular	65.44	56.87
Solyc01g006310.2.1	Tomato	extracellular, golgi	68.75	56.67
CDX92492	Canola	extracellular	66.91	55.66
Os03t0235000-01	Rice	extracellular	41.91	55.61
CDY35842	Canola	extracellular	67.28	55.29
VIT_05s0077g00720.t01	Wine grape	extracellular	55.15	54.95
AT5G19890.1	Thale cress	extracellular	65.81	54.57
EER92588	Sorghum	extracellular	66.18	54.22
Zm00001d028349_P001	Maize	extracellular	65.44	53.29
TraesCS1D01G096300.1	Wheat	extracellular	64.34	52.87
TraesCS1A01G104200.1	Wheat	extracellular	63.97	52.57
EER91558	Sorghum	extracellular	62.87	52.45
Os10t0109600-01	Rice	extracellular	62.5	52.15
HORVU1Hr1G020800.1	Barley	endoplasmic reticulum, extracellular, vacuole	63.24	51.96
TraesCS4B01G232700.1	Wheat	extracellular	62.5	51.67
Zm00001d014123_P001	Maize	extracellular	62.87	51.66
TraesCS4A01G076600.1	Wheat	extracellular	62.13	51.37
TraesCS1B01G115800.1	Wheat	extracellular	62.5	51.36
Zm00001d032854_P001	Maize	extracellular	63.24	51.19
TraesCS4D01G233900.1	Wheat	extracellular	61.76	51.06
TraesCS1D01G096200.1	Wheat	extracellular	62.13	51.06
TraesCS1B01G115000.1	Wheat	extracellular	61.4	50.45
TraesCS1A01G104100.1	Wheat	extracellular	61.03	50.15
TraesCS1B01G115700.1	Wheat	extracellular	61.03	50.15
HORVU1Hr1G020720.1	Barley	extracellular	60.66	49.7
HORVU4Hr1G064960.3	Barley	cytosol, extracellular	62.13	47.61
VIT_00s0567g00020.t01	Wine grape	extracellular	55.51	46.18
VIT_04s0023g02570.t01	Wine grape	extracellular	55.51	45.48
VIT_08s0007g06650.t01	Wine grape	extracellular, vacuole	55.15	44.78
VIT_06s0004g01180.t01	Wine grape	extracellular	54.41	43.4
VIT_06s0004g01190.t01	Wine grape	extracellular	48.16	42.95
VIT_02s0012g00540.t01	Wine grape	extracellular	51.47	42.17
VIT_03s0063g01040.t01	Wine grape	extracellular	50.74	41.95
VIT_18s0001g13110.t01	Wine grape	extracellular	51.47	40.58
VIT_07s0191g00050.t01	Wine grape	extracellular	47.79	39.88
VIT_01s0010g01090.t01	Wine grape	extracellular, vacuole	49.63	39.82

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100253646	wikigene:100253646	MapMan:35.1
ProteinID:CCB43770	ProteinID:CCB43770.1	UniProt:F6GUE9	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100253646
wikigene:LOC100253646	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF6	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI0002108C34	ArrayExpress:VIT_06s0004g01240	EnsemblPlantsGene:VIT_06s0004g01240	EnsemblPlants:VIT_06s0004g01240.t01
unigene:Vvi.24134	RefSeq:XP_002285642	RefSeq:XP_002285642.1	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6GUE9]

Coordinates

chr6:+:1429345..1431571

Molecular Weight (calculated)

28625.4 Da

IEP (calculated)

4.582

GRAVY (calculated)

-0.069

Length

272 amino acids

Sequence
(BLAST)

001: MAASLVRLHF HDCFVNGCDG SVLLDGSDGE KSALPNLNSV RGFDVVDTIK SSVESACPGV VSCADILAIA ARDSVLLSGG NTWKVFLGRR DGLVANQTGA
101: NNGLPFPTDS LDTITQKFAN VGLNQTDVVS LSGAHTIGLA RCTTFSSRLF NFSGTGAADS TMDTEMVSDL QTLCPQSGDG NTTTSLDQNS TDLFDNHYFK
201: NLLVGKGLLS SDQILFTGDA AASTTKSLVQ NYSSDSGLFF SDFTNSMIKM GNINPKTGSN GEIRTNCRVV NS

Best Arabidopsis Sequence Match ( AT5G19890.1 )
(BLAST)

001: MKTQTKVMGG HVLLTVFTLC MLCSGVRAQL SPDIYAKSCP NLVQIVRKQV AIALKAEIRM AASLIRLHFH DCFVNGCDAS LLLDGADSEK LAIPNINSAR
101: GFEVIDTIKA AVENACPGVV SCADILTLAA RDSVVLSGGP GWRVALGRKD GLVANQNSAN NLPSPFEPLD AIIAKFVAVN LNITDVVALS GAHTFGQAKC
201: AVFSNRLFNF TGLGNPDATL ETSLLSNLQT VCPLGGNSNI TAPLDRSTTD TFDNNYFKNL LEGKGLLSSD QILFSSDLAV NTTKKLVEAY SRSQSLFFRD
301: FTCAMIRMGN ISNGASGEVR TNCRVINN

Arabidopsis Description

PER59Peroxidase 59 [Source:UniProtKB/Swiss-Prot;Acc:Q39034]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.