Factsheet for VIT_02s0012g00540.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77230	Soybean	extracellular	70.18	70.18
CDX84214	Canola	extracellular	63.55	65.33
CDY65368	Canola	extracellular	62.95	64.91
AT2G35380.1	Thale cress	extracellular	65.36	64.58
Bra005346.1-P	Field mustard	extracellular	62.95	62.76
KRG89577	Soybean	cytosol	43.67	62.5
GSMUA_AchrUn_...	Banana	extracellular	56.33	61.31
VIT_05s0077g00720.t01	Wine grape	extracellular	42.77	52.01
VIT_06s0004g01240.t01	Wine grape	extracellular	42.17	51.47
VIT_04s0023g02570.t01	Wine grape	extracellular	50.0	50.0
VIT_18s0001g13110.t01	Wine grape	extracellular	48.8	46.96
VIT_01s0010g01090.t01	Wine grape	extracellular, vacuole	47.59	46.61
VIT_00s0567g00020.t01	Wine grape	extracellular	44.88	45.57
VIT_08s0007g06650.t01	Wine grape	extracellular, vacuole	43.98	43.58
VIT_06s0004g01180.t01	Wine grape	extracellular	44.28	43.11
VIT_07s0191g00050.t01	Wine grape	extracellular	42.17	42.94
VIT_06s0004g01190.t01	Wine grape	extracellular	38.25	41.64
VIT_03s0063g01040.t01	Wine grape	extracellular	39.46	39.82

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100262575	wikigene:100262575	MapMan:35.1
ProteinID:CBI33950	ProteinID:CBI33950.3	UniProt:D7TTH0	EMBL:FN596247	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	EntrezGene:LOC100262575	wikigene:LOC100262575	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF47	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TIGR:TC54999
UniParc:UPI0001982C95	ArrayExpress:VIT_02s0012g00540	EnsemblPlantsGene:VIT_02s0012g00540	EnsemblPlants:VIT_02s0012g00540.t01	RefSeq:XP_002279208	RefSeq:XP_002279208.1

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:D7TTH0]

Coordinates

chr2:-:6404343..6406186

Molecular Weight (calculated)

37335.9 Da

IEP (calculated)

5.992

GRAVY (calculated)

-0.089

Length

332 amino acids

Sequence
(BLAST)

001: MEFMRILLSI LVLIFHGNTG VLSEAGVLVL DYYKEACPLV EEIVRRNVEI AVLRDPRMAA SLLRLHFHDC FVMGCDASIL LDTFGDMISE KQAGPNLNSV
101: RGFGVIDNIK HLVEEACPYT VSCADILAIV ARDAVVLRGG PRWEVWLGRK DSLKASFDGA NQFIPAPNSS LETLIANFKQ QGLDTGDLVT LSGSHTMGKA
201: RCVSFRQRIY EKSTEENFDY YKRYTTFRRI LRSICPESGR DDALGALDFK TPTRFDNLYF HNIIEGKGLL QSDNVLVRED LEGEIREQVR AYASDQQLFF
301: ASYVNSIVKM GNINVLTGNE GEVRKNCRFV NP

Best Arabidopsis Sequence Match ( AT2G35380.1 )
(BLAST)

001: MEIKQKKVWL SLIVLYAITT SVLGDFGEPL LKGFYKESCP LAEEIVKHNI EVAVLKDPRM AASLLRLQFH DCFVLGCDAS VLLDTHGDML SEKQATPNLN
101: SLRGFEVIDY IKYLLEEACP LTVSCSDILA LAARDSVFLR GGPWWEVLLG RRDSLKASFA GANQFIPAPN SSLDSLIINF KQQGLNIQDL IALSGAHTIG
201: KARCVSFKQR IVQPNMEQTF YVDEFRRHST FRRVLGSQCK DSSRDNELSP LDIKTPAYFD NHYFINLLEG RGLLISDNVL VSEDHEGEIF QKVWEYAVNQ
301: DLFFIDFVES MLKMGNINVL TGIEGEIREN CRFVNI

Arabidopsis Description

PER20Peroxidase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.