CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22922	Soybean	endoplasmic reticulum	77.57	15.4
KRG89017	Soybean	endoplasmic reticulum	99.07	15.25
Zm00001d040240_P001	Maize	plasma membrane, vacuole	1.87	1.32
KRH70033	Soybean	golgi	2.8	0.75
KRH70034	Soybean	plasma membrane	2.8	0.52
KRH24908	Soybean	golgi, nucleus, plasma membrane	2.8	0.52
KRH28943	Soybean	plasma membrane	2.8	0.5
KRH60889	Soybean	plasma membrane	1.87	0.38
KRH51571	Soybean	plasma membrane	1.87	0.38
KRH08380	Soybean	plasma membrane	1.87	0.35
KRH25665	Soybean	cytosol, plasma membrane, vacuole	1.87	0.35
KRH55861	Soybean	nucleus, plasma membrane, vacuole	1.87	0.35
KRH76519	Soybean	golgi	1.87	0.33
KRH44082	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	0.93	0.18
KRH08381	Soybean	plasma membrane	0.93	0.17
KRH26395	Soybean	golgi, plasma membrane	0.93	0.17
KRH67665	Soybean	plasma membrane	0.0	0.0
KRH66249	Soybean	cytosol, golgi, plasma membrane	0.0	0.0
KRH60891	Soybean	plasma membrane	0.0	0.0
KRH72065	Soybean	plasma membrane	0.0	0.0
KRH60671	Soybean	cytosol, golgi, plasma membrane	0.0	0.0
KRH76645	Soybean	cytosol, golgi, plasma membrane	0.0	0.0
KRH55331	Soybean	nucleus	0.0	0.0
KRH34892	Soybean	plasma membrane	0.0	0.0
KRH51573	Soybean	endoplasmic reticulum, nucleus, plasma membrane	0.0	0.0
KRH51360	Soybean	cytosol, golgi, plasma membrane	0.0	0.0
KRH39404	Soybean	plasma membrane	0.0	0.0
KRH28808	Soybean	cytosol, golgi, plasma membrane	0.0	0.0
KRH27226	Soybean	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
KRH26393	Soybean	plasma membrane	0.0	0.0
KRH26358	Soybean	plasma membrane	0.0	0.0
KRH22115	Soybean	plasma membrane	0.0	0.0
KRH21344	Soybean	nucleus, plasma membrane, vacuole	0.0	0.0
KRH11698	Soybean	plasma membrane	0.0	0.0
KRH07806	Soybean	plasma membrane	0.0	0.0
KRH07301	Soybean	plasma membrane	0.0	0.0
KRG95953	Soybean	plastid	0.0	0.0
KRG91873	Soybean	plasma membrane	0.0	0.0

Protein Annotations

EntrezGene:100795313	EntrezGene:106795243	MapMan:23.3.1.3.2	EMBL:ACUP02007190	EnsemblPlantsGene:GLYMA_12G070500	GO:GO:0003674
GO:GO:0005086	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005784	GO:GO:0006616	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0015450	GO:GO:0016020	GO:GO:0016021
GO:GO:0031204	GO:GO:0031205	GO:GO:0065009	UniProt:I1LKD9	EnsemblPlants:KRH24907	ProteinID:KRH24907
ProteinID:KRH24907.1	PFAM:PF03911	PIRSF:PIRSF006398	PANTHER:PTHR13509	PANTHER:PTHR13509:SF8	InterPro:Sec61-beta/Sbh
InterPro:SecG/Sec61-beta/Sbh	TMHMM:TMhelix	UniParc:UPI000233D6D9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:-:5158891..5160089

Molecular Weight (calculated)

10887.1 Da

IEP (calculated)

12.155

GRAVY (calculated)

0.056

Length

107 amino acids

Sequence
(BLAST)

001: MARGASQSQS TASHATTRPG VMAPRGTAAA TAGMRRRRLG GGTSSASVSG GSGAGGSNML RFYTDDAPGL KISPTVVLVM SLCFIGFVTA LHVFGKLYRY
101: RSSGATV

Best Arabidopsis Sequence Match ( AT5G60460.1 )
(BLAST)

001: MARGSSQSQQ STSTGSSTAR PGLAAPRGSA AATAGMRRRR LGGGGGVSSG GGSGVGSGSS NMLRFYTDDA PGLKISPTVV LIMSLCFIGF VTALHVFGKL
101: YLHKSGSQA

Arabidopsis Description

Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9FKK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.