CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049206_P001	Maize	plastid	71.25	63.33
OQU87017	Sorghum	cytosol, nucleus, plastid	53.75	51.5
Os01t0575400-00	Rice	mitochondrion	45.62	40.11
KXG37379	Sorghum	plastid	41.25	39.88
EER93315	Sorghum	cytosol	41.25	39.52
EER91105	Sorghum	cytosol	41.25	36.57
EES16801	Sorghum	cytosol	38.12	36.2
EER93705	Sorghum	plastid	40.0	35.46
EES18742	Sorghum	cytosol, nucleus, plastid	41.56	35.09
OQU91660	Sorghum	cytosol	35.0	35.0
Solyc04g049530.1.1	Tomato	nucleus, plasma membrane, vacuole	8.75	34.15
OQU89148	Sorghum	cytosol	33.44	33.54
KXG37930	Sorghum	cytosol, plastid	39.38	31.03
OQU76223	Sorghum	cytosol, plastid	30.62	30.82
KXG19510	Sorghum	cytosol	30.31	30.79
EER96280	Sorghum	cytosol, plastid	36.88	30.26
OQU89970	Sorghum	cytosol	38.75	29.18
OQU89971	Sorghum	cytosol	38.75	29.18
OQU89972	Sorghum	cytosol	38.75	29.18
EER99400	Sorghum	cytosol	38.75	29.18
OQU83399	Sorghum	cytosol, mitochondrion, nucleus, plastid	33.12	28.34
EES00040	Sorghum	cytosol	32.5	27.51
OQU83726	Sorghum	cytosol	30.31	27.17
OQU89590	Sorghum	cytosol	27.81	25.5
KXG37871	Sorghum	plastid	40.94	11.33

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A1B6PSM8	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG28672	ProteinID:KXG28672	ProteinID:KXG28672.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF237
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3005G151000	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00081AD0A2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:61989652..61990611

Molecular Weight (calculated)

33758.1 Da

IEP (calculated)

7.955

GRAVY (calculated)

-0.024

Length

320 amino acids

Sequence
(BLAST)

001: MAVVVAPTRR PRGAAQNRRG AKKNGGDKAA RVSVVDSSYK ILKKIGQGGH GAVSMARHVE SGELVAIKSS LHAGAAALLL REAAMLAACA GNPAVVRLRE
101: VARGRGTDMR DLHLVMEYVA GGSLHDVIVS RRRHGHLSPF SESETRSAMA QLLAGVSTMH AHGVVHRDLK PGNVLVGEGD GRLKICDLGL ARSVVAPPPT
201: DDTRDPEGTP GYMAPELLLG EKDCGAPVDV WALGCIMAVL VAGQPLFPEE DLCQQLISIV NLLGIPDDVS LMPLGVSGPS KLRERVPEEL LSPAGFDVLQ
301: GLLEYNPKDR LTAGDALKMP

Best Arabidopsis Sequence Match ( AT5G63370.2 )
(BLAST)

001: MSPEPSYLAP VQPSEALLAV KHPVDDLEEG QLEEEQVMQE DVKEGLLEEE QVMQEPNIKT SRWGTGLTSP KEELISVNVS KTNRWNRSSL TPECEEVMVS
101: EEQQCYSSGS GSGHLSVEKL SADGNSGREY YSSDHDELEH EDQDSLTPGE MNMMFGSRSV NEFQKLNKIN EGTYGIVYKA RDEKTKEIVA LKKIKMKEDR
201: FEEEYGFPLT SLREINILLS CNHPAIVNVK EVVVGGKNDN DVYMVMEHLE HDLRGVMDRR KEPFSTSEVK CLMMQLLDGL KYLHTNWIIH RDLKPSNLLM
301: NNCGELKICD FGMARQYGSP IKPYTQMVIT QWYRPPELLL GAKEYSTAVD MWSVGCIMAE LLSQKPLFPG KSELDQLQKI FAVLGTPNEA IWPGFSSFPN
401: AKAKFPTQPY NMLRKKFPAI SFVGGQILSE RGFDLLNSLL TLDPEKRLTV EDALNHGWFH EVPLPKSKDF MPTYPPKR

Arabidopsis Description

CDKG1Cyclin-dependent kinase G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.