CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28672	Sorghum	mitochondrion	51.5	53.75
KXG37379	Sorghum	plastid	41.62	41.99
EER93315	Sorghum	cytosol	41.32	41.32
EER93705	Sorghum	plastid	40.72	37.67
EES16801	Sorghum	cytosol	37.43	37.09
Os01t0575400-00	Rice	mitochondrion	40.12	36.81
EER91105	Sorghum	cytosol	39.52	36.57
OQU89148	Sorghum	cytosol	33.23	34.8
OQU91660	Sorghum	cytosol	33.23	34.69
EES18742	Sorghum	cytosol, nucleus, plastid	38.32	33.77
Solyc04g049530.1.1	Tomato	nucleus, plasma membrane, vacuole	8.08	32.93
KXG19510	Sorghum	cytosol	30.24	32.06
KXG37930	Sorghum	cytosol, plastid	38.92	32.02
EER96280	Sorghum	cytosol, plastid	36.83	31.54
OQU89970	Sorghum	cytosol	40.12	31.53
OQU89971	Sorghum	cytosol	40.12	31.53
OQU89972	Sorghum	cytosol	40.12	31.53
EER99400	Sorghum	cytosol	40.12	31.53
OQU76223	Sorghum	cytosol, plastid	29.94	31.45
OQU83399	Sorghum	cytosol, mitochondrion, nucleus, plastid	33.53	29.95
EES00040	Sorghum	cytosol	32.93	29.1
OQU83726	Sorghum	cytosol	30.84	28.85
OQU89590	Sorghum	cytosol	29.94	28.65
KXG37871	Sorghum	plastid	39.22	11.33

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	EntrezGene:8075017	UniProt:A0A1W0VXZ6	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU87017	ProteinID:OQU87017
ProteinID:OQU87017.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF237	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G189466	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A84D58	RefSeq:XP_002458008.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:50898696..50899700

Molecular Weight (calculated)

36049.6 Da

IEP (calculated)

8.131

GRAVY (calculated)

-0.175

Length

334 amino acids

Sequence
(BLAST)

001: MSTSAAASST VTAGTSDTLD NIRIGRVDSY RKLDKIGAGA FGDVWKARHR RSGKKVAIKS VRASGESLLR EAALLAACTG NPAVVEFREV VRDAKKDKLY
101: LVMEYAGRSL HYVMGERRRD GRPFTEAEAR RVMKRLLGGV EIMHGHGVVH CDLKPANVLV GKEGSRGRGR GRVLKICDLG LAKSSTVPLP SPDTSRPVQG
201: TLGYMAPEQL MGDMDGCSTP VDMWSLGCVM AELVSGKPIF KVEVSVCEHL AEIVRLLGVP DEASQMPLGV SASTPSQLRD AVPEEFLSMA GFDVLRGLLE
301: FDPRERLTAA AALQMPWFTV EEDDDAPSPA TARP

Best Arabidopsis Sequence Match ( AT5G63370.2 )
(BLAST)

001: MSPEPSYLAP VQPSEALLAV KHPVDDLEEG QLEEEQVMQE DVKEGLLEEE QVMQEPNIKT SRWGTGLTSP KEELISVNVS KTNRWNRSSL TPECEEVMVS
101: EEQQCYSSGS GSGHLSVEKL SADGNSGREY YSSDHDELEH EDQDSLTPGE MNMMFGSRSV NEFQKLNKIN EGTYGIVYKA RDEKTKEIVA LKKIKMKEDR
201: FEEEYGFPLT SLREINILLS CNHPAIVNVK EVVVGGKNDN DVYMVMEHLE HDLRGVMDRR KEPFSTSEVK CLMMQLLDGL KYLHTNWIIH RDLKPSNLLM
301: NNCGELKICD FGMARQYGSP IKPYTQMVIT QWYRPPELLL GAKEYSTAVD MWSVGCIMAE LLSQKPLFPG KSELDQLQKI FAVLGTPNEA IWPGFSSFPN
401: AKAKFPTQPY NMLRKKFPAI SFVGGQILSE RGFDLLNSLL TLDPEKRLTV EDALNHGWFH EVPLPKSKDF MPTYPPKR

Arabidopsis Description

CDKG1Cyclin-dependent kinase G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.