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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020657_P001 Maize nucleus 59.89 61.47
TraesCS5B01G230200.1 Wheat cytosol 41.83 38.52
TraesCS5A01G231900.1 Wheat cytosol 41.55 38.26
KXG37379 Sorghum plastid 33.52 35.35
EER93315 Sorghum cytosol 32.66 34.13
EES18742 Sorghum cytosol, nucleus, plastid 36.96 34.04
OQU89972 Sorghum cytosol 40.4 33.18
EER99400 Sorghum cytosol 40.4 33.18
OQU89971 Sorghum cytosol 40.4 33.18
OQU89970 Sorghum cytosol 40.4 33.18
EER91105 Sorghum cytosol 34.1 32.96
EER93705 Sorghum plastid 34.1 32.96
KXG37930 Sorghum cytosol, plastid 35.82 30.79
OQU87017 Sorghum cytosol, nucleus, plastid 28.65 29.94
EES16801 Sorghum cytosol 28.37 29.38
Solyc04g049530.1.1 Tomato nucleus, plasma membrane, vacuole 6.59 28.05
KXG28672 Sorghum mitochondrion 25.5 27.81
OQU91660 Sorghum cytosol 25.21 27.5
OQU76223 Sorghum cytosol, plastid 24.36 26.73
KXG19510 Sorghum cytosol 24.07 26.67
OQU89148 Sorghum cytosol 23.21 25.39
EER96280 Sorghum cytosol, plastid 27.51 24.62
EES00040 Sorghum cytosol 25.5 23.55
OQU83399 Sorghum cytosol, mitochondrion, nucleus, plastid 24.36 22.73
OQU83726 Sorghum cytosol 20.92 20.45
KXG37871 Sorghum plastid 34.96 10.55
Protein Annotations
Gene3D:1.10.510.10MapMan:50.2.7UniProt:A0A1W0W5C7GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:Kinase-like_dom_sfEnsemblPlants:OQU89590ProteinID:OQU89590ProteinID:OQU89590.1PFAM:PF00069ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF331InterPro:Prot_kinase_domSMART:SM00220EnsemblPlantsGene:SORBI_3002G219600
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0009DC887ASEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:61113897..61115033
Molecular Weight (calculated)
38565.0 Da
IEP (calculated)
10.497
GRAVY (calculated)
-0.178
Length
349 amino acids
Sequence
(BLAST)
001: MDATRLAAVC AKIDEYAARG APMSGNKIAA ICAMIDDGAT ARKHGRNRRR RRRRLCVDST RSYKQIGEFR RPNLVGLHAV ARDPRTKEYS VVMEYADGPS
101: LRHALKEHLR AAPFPEADVR RVMRQLLTGA EAMHSRRIIH RDIKTGNFIV NEDGSAVKIC DCLRAGAVST AANPGGHACP RAGTVAYMAP EVLKYRSDYD
201: ERVDLWSIGC VMAELLSGKG VVQGDVGDII FMSPFMASKV LRRRARQPRP RRDSRLREIF ASDVLSQDGY DVLKGLLTCN PKERLTAATA LQLPWFTAGT
301: VGVPASEVGA TESTTQTALL IVLVVTSVWA FLRKMALPLI KLPHQLFLR
Best Arabidopsis Sequence Match ( AT1G18670.2 )
(BLAST)
001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLV RL
Arabidopsis Description
IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.