CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G004300.1	Wheat	cytosol	23.75	48.63
TraesCS2D01G024500.2	Wheat	cytosol	37.52	40.16
Os11t0223201-01	Rice	cytosol	40.44	39.62
TraesCS2B01G033600.1	Wheat	cytosol	38.0	33.77
OQU83234	Sorghum	cytosol, mitochondrion, peroxisome, plastid	32.16	31.43
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	35.93	30.1
OQU83390	Sorghum	nucleus	29.23	23.95
KXG35388	Sorghum	cytosol	32.16	23.91
KXG24023	Sorghum	nucleus	32.03	22.61
TraesCS2D01G004500.1	Wheat	cytosol	33.13	22.2
HORVU2Hr1G003540.3	Barley	plasma membrane	39.59	21.05
TraesCS2B01G033500.1	Wheat	cytosol	38.37	20.14
TraesCS1B01G010000.1	Wheat	cytosol	39.46	17.75
EER98716	Sorghum	nucleus	33.13	17.17

Protein Annotations

Gene3D:1.10.8.430	MapMan:18.8.2	Gene3D:3.40.30.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	UniProt:A0A1B6PTC4
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0043531	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:IPR032675	EnsemblPlants:KXG28913	ProteinID:KXG28913	ProteinID:KXG28913.1
InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00462	PFAM:PF00931	PRINTS:PR00364
PFscan:PS51354	PANTHER:PTHR43889	PANTHER:PTHR43889:SF3	EnsemblPlantsGene:SORBI_3005G182800	SUPFAM:SSF52058	SUPFAM:SSF52540
SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI00081AC719	:	:

Description

hypothetical protein

Coordinates

chr5:-:66574813..66578546

Molecular Weight (calculated)

92248.3 Da

IEP (calculated)

5.962

GRAVY (calculated)

-0.026

Length

821 amino acids

Sequence
(BLAST)

001: MEALNCASMG AMGSLLWKLD KLPHTAPEAE DQAQAIRQLR NGVANIRTKL VELSEVHEQH ESPLTANYWM KEARELSYDM EDCVDQFVLA DSESDAKVAF
101: ADEISGFRIR VAEVMERYYR FKLGYVLSCP TVINKASACP RLRRASGDTN RVALVGIECQ INELVGLLKP NNGGDERELQ LKVVSILGVE GVGKSTVAQE
201: LWRVLGEEFE CRAFVHAAKK PNMRLILTNI LLQIRPNHPP EVCRVPNLIQ DITNHLQDKR YCIMVDDLWA VSVWETISRA FPEGNCCSRI ITTTTIEDVA
301: LACCSYDPEH VFKMKPLSYN HSKDLLIRTV FGSGNECPQQ LHDVSDKITR TCCGLPLAIT CIASLLATKP QIVHQWEYVQ NLLCDSLTRN PTSVEILKQV
401: LNICYTSLPH SLKTCLLYLS VYPENYLILK YNLVRQWVAE DFIDAMENKD IVEVATSYFD ELVSLGLIQR LDISCNEKGM SYLVHPVVFE FIKCKSIEDN
501: FITIIDYSQS AVALTEKIRR LSLHFGSATY ATTPESIEPL HVRSLSFMGL LNSMPSLVDF KLVRVIILHV LVDNECTSFP LTGICQLLLL RYLQVRCNVT
601: VELPDKIGCL KHLEILEIHE SVAGVPTDID HLPILKKLCL GRKRYCMERD EVLKIEDSNG EYDDPIENLV KDKEIEDPNE RDEVLKIQHG AHKDELSSDE
701: DELLGKIQGD DMKKHAIGRV MKLASKRAVV MFTLSNCCLS HTVKSLMAEL GVAALVYDLD SVPRGKEMER ALSKMIGGER PIPAIFIGGR LVGGVNNVMS
801: LHLSGKLVPM LKRAGAISIY V

Best Arabidopsis Sequence Match ( AT3G46710.1 )
(BLAST)

001: MVDAITEFVV GKIDNYLIEE APMLIGVKDD LEELKTELTC IQVYLKNVEV CDKEDEVSKE WTKLVLDIAY DVEDVLDTYF LKLEKRLHRL GLMRLTNIIS
101: DKKDAYNILD DIKTLKRRTL DVTRKLEMYG IGNFNEHRVV ASTSRVREVR RARSDDQEER VVGLTDDAKV LLTKLLDDDG DNKIYMISIF GMEGLGKTSL
201: ARKLFNSSDV KESFEYRVWT NVSGECNTRD ILMRIISSLE ETSEGELEKM AQQELEVYLH DILQEKRYLV VVDDIWESEA LESLKRALPC SYQGSRVIIT
301: TSIRVVAEGR DKRVYTHNIR FLTFKESWNL FEKKAFRYIL KVDQELQKIG KEMVQKCGGL PRTTVVLAGL MSRKKPNEWN DVWSSLRVKD DNIHVSSLFD
401: LSFKDMGHEL KLCFLYLSVF PEDYEVDVEK LIQLLVAEGF IQEDEEMTME DVARYYIEDL VYISLVEVVK RKKGKLMSFR IHDLVREFTI KKSKELNFVN
501: VYDEQHSSTT SRREVVHHLM DDNYLCDRRV NTQMRSFLFF GKRRNDITYV ETITLKLKLL RVLNLGGLHF ICQGYSPWSL PDVIGGLVHL RYLGIADTVV
601: NNLPDFISNL RFLQTLDASG NSFERMTDLS NLTSLRHLTG RFIGELLIGD AVNLQTLRSI SSYSWSKLKH ELLINLRDLE IYEFHILNDQ IKVPLDLVSL
701: SKLKNLRVLK IEVVSFSLFS EETVRFELLV KLTLHCDVRR LPRDMDLIFP SLESLTLVTN LQEDPMPTLQ KLQRLENLVL YSCVYPGAKM FINAQGFGRL
801: RKLKVIIKRL DELEIEEEAM PCLMKLNLDN KDGATKLMIP DRMRAFV

Arabidopsis Description

RPP13L2Putative disease resistance RPP13-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.