Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G023400.1 | Wheat | cytosol, endoplasmic reticulum, plastid, vacuole | 93.87 | 73.47 |
| TraesCS2B01G033600.1 | Wheat | cytosol | 77.05 | 63.96 |
| Os11t0223201-01 | Rice | cytosol | 51.89 | 47.49 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 53.98 | 42.81 |
| KXG28913 | Sorghum | cytosol | 40.16 | 37.52 |
| HORVU2Hr1G003540.3 | Barley | plasma membrane | 74.58 | 37.05 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 57.5 | 36.0 |
| TraesCS5D01G494600.1 | Wheat | cytosol | 33.12 | 34.37 |
| TraesCS1D01G028900.1 | Wheat | cytosol | 35.85 | 33.01 |
| TraesCS1B01G010000.1 | Wheat | cytosol | 77.44 | 32.55 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 40.42 | 30.57 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 40.29 | 30.47 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 39.63 | 30.4 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 12.65 | 30.22 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 12.39 | 29.78 |
| TraesCS7D01G005300.1 | Wheat | cytosol | 12.39 | 27.86 |
| TraesCS2D01G574800.1 | Wheat | cytosol | 9.65 | 27.82 |
| TraesCS4D01G089900.1 | Wheat | plastid | 46.94 | 27.17 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 41.07 | 24.92 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 43.16 | 24.55 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 41.07 | 23.95 |
| TraesCS5D01G492000.1 | Wheat | cytosol | 8.87 | 22.9 |
| TraesCS7D01G005400.1 | Wheat | cytosol, nucleus, peroxisome | 40.29 | 22.57 |
| TraesCS5D01G332000.1 | Wheat | cytosol | 41.59 | 21.82 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 40.42 | 21.8 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 40.42 | 20.23 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 40.03 | 20.12 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 40.16 | 20.0 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 14.73 | 19.69 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 40.03 | 19.55 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 40.81 | 18.83 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 40.68 | 15.87 |
| TraesCS7D01G024900.1 | Wheat | golgi | 41.46 | 15.12 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G024500.2 | EnsemblPlantsGene:TraesCS2D01G024500 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF3 | PFAM:PF00931 | PRINTS:PR00364 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:10831623..10835466
Molecular Weight (calculated)
86472.7 Da
IEP (calculated)
5.817
GRAVY (calculated)
-0.049
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLLPPISA SLGAMGSLAH KLDALLDTEH KDEMGKLGTR LLELSKARDP PVTARIWMKD VRELSYDMEN FVDTEEDWIH NMSPFMGRVK EANARYERYR
101: LESIPSHTDV FPIIHHRGRE TGLVVGLHDK GGPVDRLCQL LTDGDEQLKV LSIVGVGGIG KTTLAKQLWR EHKLRDYFHC RAFVRTAKKP DMRRILRSIL
201: AQVRPHQPPD ASEVDDLIHD LTEHLQDKRY IIIIDDIWAT SVWDVATCAF PEGNHGSRII TTTEIEDVAL ACCSYQSKYI FKMEPLSVSQ SKELFTNAVF
301: GSGKEKSPQL DEVSDEIIRI CDGLPQAIIS ISSVLVSHRE ANAVENWEHV QNNLPTSTTS DEILNFCYNS LPSCVQTCLL YLGIYPENYI ILKEDIMKQW
401: VAECFIRAPT EKEKMEVAGS YFDMLVNMGM IQHIDVDYSN TVLYYAVNHM VHDLITSKSI EDNFITVIDY SQRQLRLSNK VSRLSLQFGG ASFATTPAST
501: GLSQIRSLTF IGLMSCFPSV VEFKLLRFLN LHIWSDQPST YFDLRVICEF GLLRYLQVTC SDTVYLPDQM QGLKHLETLE INARVIVIPS DVVHLQSLLH
601: LRLGGGTELP DVTGIPRNVT VPSVANLLDE SSSPPKSVMT IELLPPICRI PEWIGQLNNL CILKVVVGEL LRDDIHILGG LPALTVLTLH VQRRTTELIG
701: FTPGAFNALE YFEFRCGVLR LMFEEGAMPN LQRIKLGFNS HRGEQYGRLL VGIEHLSNVQ EISGIIG
101: LESIPSHTDV FPIIHHRGRE TGLVVGLHDK GGPVDRLCQL LTDGDEQLKV LSIVGVGGIG KTTLAKQLWR EHKLRDYFHC RAFVRTAKKP DMRRILRSIL
201: AQVRPHQPPD ASEVDDLIHD LTEHLQDKRY IIIIDDIWAT SVWDVATCAF PEGNHGSRII TTTEIEDVAL ACCSYQSKYI FKMEPLSVSQ SKELFTNAVF
301: GSGKEKSPQL DEVSDEIIRI CDGLPQAIIS ISSVLVSHRE ANAVENWEHV QNNLPTSTTS DEILNFCYNS LPSCVQTCLL YLGIYPENYI ILKEDIMKQW
401: VAECFIRAPT EKEKMEVAGS YFDMLVNMGM IQHIDVDYSN TVLYYAVNHM VHDLITSKSI EDNFITVIDY SQRQLRLSNK VSRLSLQFGG ASFATTPAST
501: GLSQIRSLTF IGLMSCFPSV VEFKLLRFLN LHIWSDQPST YFDLRVICEF GLLRYLQVTC SDTVYLPDQM QGLKHLETLE INARVIVIPS DVVHLQSLLH
601: LRLGGGTELP DVTGIPRNVT VPSVANLLDE SSSPPKSVMT IELLPPICRI PEWIGQLNNL CILKVVVGEL LRDDIHILGG LPALTVLTLH VQRRTTELIG
701: FTPGAFNALE YFEFRCGVLR LMFEEGAMPN LQRIKLGFNS HRGEQYGRLL VGIEHLSNVQ EISGIIG
001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
Arabidopsis Description
RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.