Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G326400.2 | Wheat | cytosol | 95.55 | 96.08 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 34.82 | 50.2 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 34.47 | 49.7 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 39.74 | 45.97 |
| TraesCS7D01G005300.1 | Wheat | cytosol | 10.33 | 44.28 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 38.78 | 43.12 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 37.48 | 42.25 |
| TraesCS2D01G024500.2 | Wheat | cytosol | 21.82 | 41.59 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 39.06 | 40.15 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 26.27 | 39.71 |
| TraesCS7D01G005400.1 | Wheat | cytosol, nucleus, peroxisome | 36.73 | 39.23 |
| TraesCS1D01G028900.1 | Wheat | cytosol | 22.3 | 39.14 |
| TraesCS5D01G494600.1 | Wheat | cytosol | 19.02 | 37.62 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 38.58 | 36.81 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 37.82 | 36.24 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 38.03 | 36.1 |
| Os11t0462900-00 | Rice | plasma membrane | 37.89 | 34.93 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 7.46 | 34.17 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 36.05 | 33.57 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 7.32 | 33.33 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 22.3 | 32.6 |
| TraesCS4D01G089900.1 | Wheat | plastid | 28.18 | 31.09 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 27.36 | 29.67 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 11.22 | 28.57 |
| TraesCS2D01G574800.1 | Wheat | cytosol | 4.51 | 24.81 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 26.95 | 23.71 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 19.84 | 23.67 |
| TraesCS5D01G492000.1 | Wheat | cytosol | 4.65 | 22.9 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 26.06 | 19.38 |
| TraesCS7D01G024900.1 | Wheat | golgi | 27.09 | 18.83 |
Protein Annotations
| MapMan:15.5.12 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:IPR005202 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PFAM:PF03514 | PRINTS:PR00364 | PFscan:PS50985 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF7 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | InterPro:TF_GRAS | EnsemblPlantsGene:TraesCS5D01G332000 | EnsemblPlants:TraesCS5D01G332000.1 | SEG:seg |
Description
No Description!
Coordinates
chr5D:+:423066518..423071524
Molecular Weight (calculated)
164821.0 Da
IEP (calculated)
7.584
GRAVY (calculated)
-0.118
Length
1462 amino acids
Sequence
(BLAST)
(BLAST)
0001: METGTSILAL KRKGEEWSSA LQERGPKHSF FLAQKHSGQV TSLVDLADLE KGLTDNRSIN DSRFSSTSFP TAGDVLGQHT SVFFDPTKGL WKCRHCDWTH
0101: RLISPCRNVD FPNYQRCGQV TMEAPFGMGS LLGKLRMLLA PQECRLPSRV KDRMHLLKED VEDLSEYLGE MAEAEDLPLT AKRWMKEARE LAYDMEDNMD
0201: MCLQPARASI NTTRFICKIG RHVKIPKRLF SKRRLPKGLK WHKQIAYIAQ VPAEHSGKTR SVCKAIRVVI IRLPKRLKWY KHIMELISDF RMYIQEAIER
0301: HERYELHRCS TFRRRFLPAN HTLLTAYGGI ADMVIDDRVS EFIDSLDNDG DQQLKVVSVL GPGCLGKTAL AQVLYNKFGG QFDCTAFVRV SKRPDVVRLL
0401: REMLTQVQGQ QPTEYSKELD LAYSIREHLQ DKRYLIIIDD IWTASAWDII SDAFPKGNHG SRVITTTQME EVALTCCCYY SEHIFEMRPL DHDHSRKLFF
0501: SILFGSESDC PKELKEVTNK IVELCGGLPL ATISIASLLS SQPVIKMDLL TYLCDSLSSC LWISPSEGTR QALNLSYNNL PHYLKICLLC LNMYPEGHTI
0601: WKDDLVKQWV AEGFIHTTEG QDMEKVAASY FDELINRRFI QTLCSKYNNE VLSCTVHDVV HDLIADKCSE ENFNMVIDSS RRNVALSQKV RRLSLLFGDA
0701: KYMKTPANMR RSQVRSLTIF GLFESMPSIS EFKLLRVLNL QLSCYGDRNT INLTGISDLF QLRYLKIACD ICIQLPNHML GLQCLETLVL DSEVTAVPWD
0801: IIHLPSLLHL SLLVMTNLLD WIGSMRLIGK LNNLRDLHLT YSVPSSDHLK RSMEALGSQL SGHANLKTLA LVNGPCHKNA FVCDALKVTV SWEGLVPPPV
0901: LEVFEWSLHS CVLSRIPKWI GELGKLRILK IAVRDLPRDG IDAVRGLPSL TALSLYLQTA AVERIVFDKV GFSVLNYFNL RCSVPCLKFE ANAMPNLRKL
1001: KLGFNAPRAR MDQHGASTAI SIDHLPSLKE ICAKIRGACA DTESALATAI SNHPSNPMIN VQLVDYTFDG DELTHENKEQ DEVLVEGQDG YLKKLLISCA
1101: RAVEAKDMSA VDMMVPELSK MVSVSGDPHQ RLGAYIVEGL VARLASSGHS IYKALKCKEP RSSDLMSYMH FLYEACPYFK FGYMSANGAI AEAVKGEDMI
1201: HIIDFGISQG AQWVPLLQAL ATRPGGPPTV RITGIDDSLS AYARGGGLDL VGRRLSHIAG LCKVPFEFHS VAVAGDEVKE GHLMVIPGEA LAVNFTLELH
1301: HIPDEAVSTA NHRDRILRLV KSLSPKVVTL VEQELNTNTV PFKQRFAETL DYYTAIFESI DLTLPRDDRE RINMEQHCLA REIVNIVACE GVERVERHEV
1401: FGKWKGRLMM VGFRPCPLSS LVNATIRTLL QSYSANYQLA ERDGVLYLGW KNKPLVVSSA WH
0101: RLISPCRNVD FPNYQRCGQV TMEAPFGMGS LLGKLRMLLA PQECRLPSRV KDRMHLLKED VEDLSEYLGE MAEAEDLPLT AKRWMKEARE LAYDMEDNMD
0201: MCLQPARASI NTTRFICKIG RHVKIPKRLF SKRRLPKGLK WHKQIAYIAQ VPAEHSGKTR SVCKAIRVVI IRLPKRLKWY KHIMELISDF RMYIQEAIER
0301: HERYELHRCS TFRRRFLPAN HTLLTAYGGI ADMVIDDRVS EFIDSLDNDG DQQLKVVSVL GPGCLGKTAL AQVLYNKFGG QFDCTAFVRV SKRPDVVRLL
0401: REMLTQVQGQ QPTEYSKELD LAYSIREHLQ DKRYLIIIDD IWTASAWDII SDAFPKGNHG SRVITTTQME EVALTCCCYY SEHIFEMRPL DHDHSRKLFF
0501: SILFGSESDC PKELKEVTNK IVELCGGLPL ATISIASLLS SQPVIKMDLL TYLCDSLSSC LWISPSEGTR QALNLSYNNL PHYLKICLLC LNMYPEGHTI
0601: WKDDLVKQWV AEGFIHTTEG QDMEKVAASY FDELINRRFI QTLCSKYNNE VLSCTVHDVV HDLIADKCSE ENFNMVIDSS RRNVALSQKV RRLSLLFGDA
0701: KYMKTPANMR RSQVRSLTIF GLFESMPSIS EFKLLRVLNL QLSCYGDRNT INLTGISDLF QLRYLKIACD ICIQLPNHML GLQCLETLVL DSEVTAVPWD
0801: IIHLPSLLHL SLLVMTNLLD WIGSMRLIGK LNNLRDLHLT YSVPSSDHLK RSMEALGSQL SGHANLKTLA LVNGPCHKNA FVCDALKVTV SWEGLVPPPV
0901: LEVFEWSLHS CVLSRIPKWI GELGKLRILK IAVRDLPRDG IDAVRGLPSL TALSLYLQTA AVERIVFDKV GFSVLNYFNL RCSVPCLKFE ANAMPNLRKL
1001: KLGFNAPRAR MDQHGASTAI SIDHLPSLKE ICAKIRGACA DTESALATAI SNHPSNPMIN VQLVDYTFDG DELTHENKEQ DEVLVEGQDG YLKKLLISCA
1101: RAVEAKDMSA VDMMVPELSK MVSVSGDPHQ RLGAYIVEGL VARLASSGHS IYKALKCKEP RSSDLMSYMH FLYEACPYFK FGYMSANGAI AEAVKGEDMI
1201: HIIDFGISQG AQWVPLLQAL ATRPGGPPTV RITGIDDSLS AYARGGGLDL VGRRLSHIAG LCKVPFEFHS VAVAGDEVKE GHLMVIPGEA LAVNFTLELH
1301: HIPDEAVSTA NHRDRILRLV KSLSPKVVTL VEQELNTNTV PFKQRFAETL DYYTAIFESI DLTLPRDDRE RINMEQHCLA REIVNIVACE GVERVERHEV
1401: FGKWKGRLMM VGFRPCPLSS LVNATIRTLL QSYSANYQLA ERDGVLYLGW KNKPLVVSSA WH
001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.