Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G492000.1 | Wheat | cytosol | 25.3 | 62.96 |
| TraesCS5A01G481100.1 | Wheat | cytosol | 57.92 | 56.76 |
| TraesCS5B01G494300.1 | Wheat | cytosol | 90.39 | 46.1 |
| TraesCS2D01G574800.1 | Wheat | cytosol | 15.56 | 43.23 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 48.99 | 36.2 |
| TraesCS2D01G024500.2 | Wheat | cytosol | 34.37 | 33.12 |
| TraesCS1D01G028900.1 | Wheat | cytosol | 34.78 | 30.85 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 39.51 | 30.2 |
| OQU83390 | Sorghum | nucleus | 40.73 | 30.04 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 12.99 | 29.91 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 37.75 | 27.51 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 37.62 | 27.42 |
| Zm00001d048637_P001 | Maize | cytosol | 30.04 | 26.78 |
| TraesCS7D01G005300.1 | Wheat | cytosol | 11.77 | 25.51 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 10.96 | 25.39 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 41.68 | 22.85 |
| TraesCS4D01G089900.1 | Wheat | plastid | 40.73 | 22.72 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 37.62 | 21.99 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 37.75 | 21.22 |
| TraesCS7D01G005400.1 | Wheat | cytosol, nucleus, peroxisome | 36.94 | 19.94 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 52.64 | 19.79 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 36.67 | 19.06 |
| TraesCS5D01G332000.1 | Wheat | cytosol | 37.62 | 19.02 |
| TraesCS7D01G024900.1 | Wheat | golgi | 53.59 | 18.83 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 36.81 | 17.82 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 37.08 | 17.79 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 39.78 | 17.69 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 36.54 | 17.62 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 28.82 | 17.39 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 36.27 | 17.07 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 11.23 | 14.46 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G494600.1 | EnsemblPlantsGene:TraesCS5D01G494600 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF1 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:526561285..526568957
Molecular Weight (calculated)
82328.2 Da
IEP (calculated)
6.904
GRAVY (calculated)
-0.180
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPITASLG PMGRLLRRLR SLEASEHPMP EGLSANGIRL LKEGLEGLYD HLKGLPEADL DNPSFTPKWW TKEVRELAYD TEDFCDEVIQ SGGGGGGGSS
101: GRSAPVSAIF GVTSKRKQRL PQIAQDFSLL MSRVNDARER CKIFQFAPQT AIKSDHGQAS TSSHTPGLSI DMPALTAIAA GHSLVGVEEP RKKLVNLLAF
201: GDNQQKQLKV IPIFGSAGVG KTTVARTMYH QYGGEFQCRA FVRVSRNPDM RRLLTSILSQ IKAPGAHTFS DAQDLIDCII KHLHQKRYFI VVDDLWTASV
301: WDIISRAFPY GDCCSRILTI TQIEDVALAC SGYESEYRFN LEPLNNDESR KLFFDTVFGS ECEGGCPKEF EVVVDRIIRK CGRLPLSTLN IASLLLPSKP
401: NPAFQQWEKV ESSLPSTLRT NPTSNGMKDV IILVYDKLPL HLKTCLLYVG MYPEGYTISK DDLEKQWVAE SFVSDAEHGY FNELLRRGMI QPVDTNYHGE
501: VLSCTVNHMV LDLIRHKSME DNFIITVNYL ESTIGLPDKA RRLSIQFGGA KSAKIPEIIR MSQVRSLFFC GFSGCVPSIP DYGLLRVLIL HIWADQDKMS
601: FDLTGIGELC RLRYVQVECN ITVNLPDKIQ GLRYLETLQI DGRLSAVPSD IGDLEKLRHL RLPNQANVRD LGGLVNLQDL HLTCSTIHPV DNLEDNMKYL
701: GTVLEKLNNL KSLTLTSLRS SPVNTSRMSI SCHGLSSVS
101: GRSAPVSAIF GVTSKRKQRL PQIAQDFSLL MSRVNDARER CKIFQFAPQT AIKSDHGQAS TSSHTPGLSI DMPALTAIAA GHSLVGVEEP RKKLVNLLAF
201: GDNQQKQLKV IPIFGSAGVG KTTVARTMYH QYGGEFQCRA FVRVSRNPDM RRLLTSILSQ IKAPGAHTFS DAQDLIDCII KHLHQKRYFI VVDDLWTASV
301: WDIISRAFPY GDCCSRILTI TQIEDVALAC SGYESEYRFN LEPLNNDESR KLFFDTVFGS ECEGGCPKEF EVVVDRIIRK CGRLPLSTLN IASLLLPSKP
401: NPAFQQWEKV ESSLPSTLRT NPTSNGMKDV IILVYDKLPL HLKTCLLYVG MYPEGYTISK DDLEKQWVAE SFVSDAEHGY FNELLRRGMI QPVDTNYHGE
501: VLSCTVNHMV LDLIRHKSME DNFIITVNYL ESTIGLPDKA RRLSIQFGGA KSAKIPEIIR MSQVRSLFFC GFSGCVPSIP DYGLLRVLIL HIWADQDKMS
601: FDLTGIGELC RLRYVQVECN ITVNLPDKIQ GLRYLETLQI DGRLSAVPSD IGDLEKLRHL RLPNQANVRD LGGLVNLQDL HLTCSTIHPV DNLEDNMKYL
701: GTVLEKLNNL KSLTLTSLRS SPVNTSRMSI SCHGLSSVS
001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
Arabidopsis Description
RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.