Factsheet for TraesCS5A01G481100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G494600.1	Wheat	cytosol	56.76	57.92
TraesCS5B01G494300.1	Wheat	cytosol	91.11	47.41
TraesCS5A01G344300.1	Wheat	cytosol	34.88	44.58
TraesCS7A01G006700.1	Wheat	mitochondrion	12.47	41.41
TraesCS4A01G489200.1	Wheat	extracellular	8.49	39.75
TraesCS4A01G489500.1	Wheat	cytosol	24.93	39.5
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	29.84	38.73
TraesCS7A01G006600.3	Wheat	cytosol	24.67	37.65
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	12.6	35.85
Zm00001d048637_P001	Maize	cytosol	38.59	35.1
TraesCS7A01G006800.1	Wheat	cytosol	17.37	34.75
TraesCS7A01G524300.1	Wheat	plasma membrane	41.51	32.0
TraesCS4A01G467000.1	Wheat	cytosol	36.87	31.06
TraesCS7A01G007200.1	Wheat	cytosol	35.94	30.08
OQU83390	Sorghum	nucleus	39.79	29.94
TraesCS7A01G031300.2	Wheat	cytosol	36.47	27.01
TraesCS4A01G457900.1	Wheat	cytosol	36.34	26.97
TraesCS2A01G564800.1	Wheat	cytosol	45.09	26.15
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	36.87	25.86
TraesCS7A01G004300.1	Wheat	cytosol	35.94	25.37
TraesCS7A01G005100.3	Wheat	cytosol	37.14	23.37
TraesCS7A01G032200.1	Wheat	cytosol	35.28	23.13
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	29.97	23.06
TraesCS4A01G464900.1	Wheat	nucleus	39.39	22.59
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	38.73	21.97
TraesCS5A01G344100.1	Wheat	nucleus	41.64	21.19
TraesCS5A01G325800.1	Wheat	cytosol	39.12	20.33
TraesCS4A01G491300.1	Wheat	plasma membrane	35.41	20.21
TraesCS7A01G004100.1	Wheat	cytosol	37.53	18.72
TraesCS4A01G488300.1	Wheat	cytosol	37.4	18.49
TraesCS2A01G004300.1	Wheat	cytosol	9.81	18.45
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	46.55	18.16
TraesCS4A01G486700.1	Wheat	cytosol	36.21	17.96
TraesCS2A01G564200.1	Wheat	cytosol	44.43	17.69
TraesCS7A01G027800.1	Wheat	golgi	46.68	16.64
TraesCS4A01G349800.1	Wheat	cytosol	37.4	13.9
TraesCS5A01G344200.2	Wheat	peroxisome	5.7	10.83
TraesCS7A01G561200.1	Wheat	cytosol	4.64	10.0
TraesCS4A01G487600.1	Wheat	nucleus	1.19	1.69
TraesCS7A01G008100.1	Wheat	cytosol	0.13	0.31
TraesCS4A01G493000.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G492400.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G489400.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G489100.1	Wheat	cytosol	0.0	0.0
TraesCS3A01G009300.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5A01G481100.1	EnsemblPlantsGene:TraesCS5A01G481100	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR43889
PANTHER:PTHR43889:SF1	PFAM:PF00931	SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	MapMan:35.1

Description

No Description!

Coordinates

chr5A:+:653708323..653711153

Molecular Weight (calculated)

84182.2 Da

IEP (calculated)

5.347

GRAVY (calculated)

-0.103

Length

754 amino acids

Sequence
(BLAST)

001: MYFIVVDDLW TASVWDIISR AFPYGDCCSR VLTTTQIEDV ALACSGYESE YIFNLQPLNN GESRKLFFDT VFGSESETGC PEEFEVVVDR IIRKCGGLPL
101: STLNIASLLL PSKPNPAFQQ WEKVESSLPS TLRTNPTSSG MKDVIILVYD KLPLHLKTCL LYVGMYPEGY TINKDDLEKQ WVAESFVSDA EHGYFNELLR
201: RGMIQPVDTN YHGEVLSCTV NHMVLDLIRH KSMEDNFIIT VNYLESTIGL PDKARRSSIQ FGGAKSAKIP ESIRMSQVRS LFFCGFSGCV PSIPDYGLLR
301: VLILHIWADR DRMSFDLTGI GELCRLRYIQ VECNITVNLP DKIQGLRYLE TLQVDGRLSA VPSDIGNLEK LRHLLLPSQA NVRDLGGLVN LQDLHLTCST
401: VHQVDNLEDN MKYLGTVLEK LSNLKSLTLT SLGSSPVNTS RMSISCHGLS SVSPAPAHLE RLELLPWICI FPSLPKWLET LSKLCSLKVA VREFSNSDID
501: IVKGLPALTA LSLYVQAAPA ERIFFGKAGF SALKYFTLKC SEPLLKFEAG AMPNLQKLNL VFSAQEVQHG AAPICIEHLA GLKEISAKIV GAGATGTESA
601: LGIYVRNDPK NPKINDQLVN WKFFEDEDRI MAPPRHAGPI IEELGEILEE NTEYEYEGED ENRQQPDSGI STLLESPPAP PWRPPDRRYG WRILSVWARA
701: RPTMKTGPQT TLKAAYEGSD SLPWWHHLAP SNTDNGQLTI AFFIQSLAVV QNFL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.