Factsheet for TraesCS2A01G564800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G524300.1	Wheat	plasma membrane	41.77	55.52
TraesCS5A01G481100.1	Wheat	cytosol	26.15	45.09
TraesCS7A01G006700.1	Wheat	mitochondrion	7.69	44.05
TraesCS5A01G344300.1	Wheat	cytosol	19.31	42.54
TraesCS2D01G574600.1	Wheat	cytosol	57.23	37.84
OQU83390	Sorghum	nucleus	28.92	37.52
TraesCS2A01G564200.1	Wheat	cytosol	54.46	37.38
Zm00001d048637_P001	Maize	cytosol	23.77	37.27
TraesCS4A01G489500.1	Wheat	cytosol	13.38	36.55
TraesCS2A01G004300.1	Wheat	cytosol	11.15	36.16
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	15.85	35.46
TraesCS4A01G467000.1	Wheat	cytosol	23.38	33.97
TraesCS7A01G006600.3	Wheat	cytosol	12.85	33.81
TraesCS7A01G006800.1	Wheat	cytosol	9.69	33.42
TraesCS7A01G007200.1	Wheat	cytosol	23.08	33.3
TraesCS4A01G457900.1	Wheat	cytosol	25.69	32.87
TraesCS7A01G031300.2	Wheat	cytosol	25.46	32.51
TraesCS7A01G561200.1	Wheat	cytosol	8.69	32.29
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	25.92	31.35
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	22.08	29.29
TraesCS7A01G032200.1	Wheat	cytosol	25.77	29.13
TraesCS4A01G489200.1	Wheat	extracellular	3.54	28.57
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	28.69	28.07
TraesCS7A01G005100.3	Wheat	cytosol	25.62	27.8
TraesCS5A01G344200.2	Wheat	peroxisome	8.38	27.46
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	5.46	26.79
TraesCS4A01G464900.1	Wheat	nucleus	26.77	26.46
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	38.31	25.76
TraesCS5A01G344100.1	Wheat	nucleus	28.85	25.3
TraesCS7A01G027800.1	Wheat	golgi	40.54	24.92
TraesCS7A01G004300.1	Wheat	cytosol	20.46	24.91
TraesCS5A01G325800.1	Wheat	cytosol	26.54	23.78
TraesCS4A01G491300.1	Wheat	plasma membrane	24.15	23.77
TraesCS3A01G009300.1	Wheat	cytosol	5.92	23.69
TraesCS7A01G004100.1	Wheat	cytosol	26.31	22.62
TraesCS4A01G488300.1	Wheat	cytosol	26.08	22.23
TraesCS4A01G486700.1	Wheat	cytosol	25.54	21.84
TraesCS4A01G493000.1	Wheat	cytosol	4.54	21.15
TraesCS7A01G008100.1	Wheat	cytosol	5.23	21.12
TraesCS4A01G489400.1	Wheat	cytosol	5.46	20.88
TraesCS4A01G489100.1	Wheat	cytosol	5.38	20.59
TraesCS4A01G349800.1	Wheat	cytosol	29.08	18.63
TraesCS4A01G487600.1	Wheat	nucleus	6.08	14.85
TraesCS4A01G492400.1	Wheat	cytosol	3.69	10.93

Protein Annotations

EnsemblPlants:TraesCS2A01G564800.1	EnsemblPlantsGene:TraesCS2A01G564800	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:Protein_BYPASS-related	PANTHER:PTHR43889	PANTHER:PTHR43889:SF1	PFAM:PF00931	PFAM:PF05633	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr2A:-:764784099..764791769

Molecular Weight (calculated)

145198.0 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.112

Length

1300 amino acids

Sequence
(BLAST)

0001: MEDPDRDMEM DDPDPASLQA AMEVPITASL GPMGPLLRKL HSIGPEECPQ DEIRPLMELF ISLKDLSDDD DASFTSGWWM KIVRELCYDM EDHLDEFVGA
0101: GTDLDFSELL ARAKDASERR QRFQWFPLKT IKQADRGGSG VNWLTSEANA ELPVPIYGRS KAGVVELPNR LVELLALDGD DKQTLKVIPI TGCAGAGKTT
0201: VARTLFHNHG GKFQCRAFLI VSRNPDMRAF FTNMISQLKA PLPLGFPDVP DLIDAVSKHL QGKRYFIVVD DLWTASVWDI ISGVFPTGDR SSRVITTTQI
0301: DDVAQACCSY EQDYIYKMEP LNDHESRKLF VSTVFGSEDG CPTDIKPVLY EIIRKCGGLP LAIVNMAILF AGESNNVMEK WKHIQDSLPS TSDMICNSLP
0401: HLMYNSLPPR LKTCLLYLSM YAQGCVIKKD ELVKQWVAEG FLGPVAGRDP EEIADGYFDE LVSRGMVQAV DTNNNGRVLS CTVHQMVLDF IRQKSMEENF
0501: IITVDYFQST LALPDKVRRL SVQFGGVKGA CMPQSIVTSQ VRSLMFWGFF KCVPYIRDYG LLRVLILHIW ADRDKKSFDL TTIGKLFQLK YLKIECNITI
0601: KLPGKIRKLQ YLGTLQVDAR LSAVPSDIVN LKRLLHLRIP SECILSRVLA QLTSLCSLGY FDIGSHSEEN VLHLGRLTNL QDLQLTCCTV QQAENLDRNV
0701: QLLGSILEKL TALQSLTLVP AASGSFCVNI PEDGFNMACP PPDLLLQRME LSRRCCIFSS LPEWFGELRR LCVLKIGIRG LSMNDTDMLK GLPALAALTL
0801: YIQTAPAERI FIDKGGFQVL TYFKLMGAAP CLSFVPGAMA KVQKLTMGFN SNQWRPYTFE TVGFSHLTGL KEVTVKLGVR DDEEFDIKAA ESALEAAIKY
0901: HPNTPILRVL FVDVIFYGGK ENKSTQAQGK SKITGRSEEN RPEINVADGE FGAFQRLAAD LLLHLLPSSE ATAAPTRDLS IAWTCRLIDT FLICLEEFRY
1001: MLLGFPLGRP PYDLLVADFL YRAIMALDLC NALREGVDLL RQWRKHLAIA AAALASTPGA PLGEGQIRRA RKALTDLTIR MIQDKDANGG QRSHSFGRAS
1101: NDKDGGRQQK GHHRRSSGSR FSSLSWSVSR SWSASRQLRA IGGNLPVPSA QDATGGLASA MSTIGVVLFF TTCLLVAAIP CQDRGVQAHS EEFKKKERKH
1201: SRGLLKEIQQ MERWSQQLME ITDVPQFPLS EEKDAEVRGA AQELVQVCQT LKGGLDSLER QVREMFHQIV HTTIEIYNCL SMPNCSAKKF PRAKHRYMFI

Best Arabidopsis Sequence Match ( AT1G18740.1 )
(BLAST)

001: MPATDFQGSF GRSLLSLRRD QVDSSTVVSG SSSHHEPSTM EVELDSFQRQ VAEKFIDLNA SSNDLLSLEW IGKLLDSFLC CQEEFRAIVF NHRSQISKSP
101: MDRLISDYFE RSIKALDVCN AIRDGIEQIR QWEKLADIVI SALDSHRPIG EGQLRRAKKA LIDLAIGMLD EKDHPSGTNL AHRNRSFGRV KDSHHRSIGH
201: FRSLSWSVSR SWSASKQLQA LASNLATPRP NDVVASNGLA VPVYTMTSVL LFVMWVLVAA IPCQDRGLQV NFFVPRHFQW AAPVMSLHDK IVEESKRRDR
301: KNCCGLLKEI DRIEKSSRLM NELIDSIHFP LNDDKEVEVK QRVDELVQVR EALRNGLDPF ERKVREVFHR IVRSRTESLD SL

Arabidopsis Description

At1g18740/F6A14_15 [Source:UniProtKB/TrEMBL;Acc:Q9M9U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.