Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G326100.1 | Wheat | cytosol | 92.07 | 91.82 |
| TraesCS7A01G006700.1 | Wheat | mitochondrion | 9.03 | 57.71 |
| TraesCS7A01G007600.1 | Wheat | endoplasmic reticulum, golgi | 23.02 | 57.49 |
| TraesCS4A01G467000.1 | Wheat | cytosol | 31.91 | 51.73 |
| TraesCS4A01G457900.1 | Wheat | cytosol | 35.01 | 50.0 |
| TraesCS7A01G007200.1 | Wheat | cytosol | 30.94 | 49.83 |
| TraesCS7A01G031300.2 | Wheat | cytosol | 34.94 | 49.8 |
| TraesCS4A01G489500.1 | Wheat | cytosol | 15.78 | 48.11 |
| TraesCS7A01G032200.1 | Wheat | cytosol | 36.94 | 46.61 |
| TraesCS4A01G493000.1 | Wheat | cytosol | 8.96 | 46.59 |
| TraesCS7A01G006600.3 | Wheat | cytosol | 15.85 | 46.56 |
| TraesCS7A01G006800.1 | Wheat | cytosol | 12.06 | 46.42 |
| TraesCS7A01G005100.3 | Wheat | cytosol | 37.22 | 45.08 |
| TraesCS7A01G008100.1 | Wheat | cytosol | 9.65 | 43.48 |
| TraesCS4A01G464900.1 | Wheat | nucleus | 38.66 | 42.66 |
| TraesCS4A01G489400.1 | Wheat | cytosol | 9.99 | 42.65 |
| TraesCS4A01G489100.1 | Wheat | cytosol | 9.92 | 42.35 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 37.77 | 42.25 |
| TraesCS5A01G344300.1 | Wheat | cytosol | 17.09 | 42.03 |
| TraesCS4A01G487700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 7.17 | 39.25 |
| TraesCS5A01G481100.1 | Wheat | cytosol | 20.33 | 39.12 |
| TraesCS4A01G491300.1 | Wheat | plasma membrane | 35.08 | 38.53 |
| TraesCS4A01G489200.1 | Wheat | extracellular | 4.2 | 37.89 |
| TraesCS7A01G004300.1 | Wheat | cytosol | 27.02 | 36.7 |
| TraesCS2A01G004300.1 | Wheat | cytosol | 10.06 | 36.41 |
| TraesCS7A01G004100.1 | Wheat | cytosol | 37.9 | 36.38 |
| TraesCS4A01G488300.1 | Wheat | cytosol | 38.11 | 36.26 |
| TraesCS7A01G561200.1 | Wheat | cytosol | 8.68 | 36.0 |
| TraesCS4A01G486700.1 | Wheat | cytosol | 36.87 | 35.2 |
| Os11t0462900-00 | Rice | plasma membrane | 38.25 | 34.99 |
| TraesCS7A01G524300.1 | Wheat | plasma membrane | 22.4 | 33.23 |
| TraesCS4A01G487600.1 | Wheat | nucleus | 12.06 | 32.89 |
| TraesCS7A01G464600.1 | Wheat | cytosol, nucleus, plasma membrane | 23.91 | 32.28 |
| TraesCS5A01G344200.2 | Wheat | peroxisome | 8.82 | 32.24 |
| TraesCS2A01G023400.1 | Wheat | cytosol, endoplasmic reticulum, plastid, vacuole | 21.3 | 31.53 |
| TraesCS4A01G492400.1 | Wheat | cytosol | 9.37 | 30.98 |
| TraesCS4A01G223400.2 | Wheat | cytosol, mitochondrion, plasma membrane, plastid | 28.12 | 30.7 |
| TraesCS5A01G344100.1 | Wheat | nucleus | 28.12 | 27.53 |
| TraesCS2A01G564800.1 | Wheat | cytosol | 23.78 | 26.54 |
| TraesCS3A01G009300.1 | Wheat | cytosol | 5.65 | 25.23 |
| TraesCS4A01G461800.1 | Wheat | endoplasmic reticulum, golgi | 26.88 | 20.18 |
| TraesCS4A01G349800.1 | Wheat | cytosol | 27.57 | 19.71 |
| TraesCS7A01G027800.1 | Wheat | golgi | 27.22 | 18.68 |
| TraesCS2A01G564200.1 | Wheat | cytosol | 24.33 | 18.64 |
Protein Annotations
| MapMan:15.5.12 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR005202 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF03514 | PRINTS:PR00364 | PFscan:PS50985 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF7 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | InterPro:TF_GRAS | EnsemblPlantsGene:TraesCS5A01G325800 | EnsemblPlants:TraesCS5A01G325800.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:536291292..536296174
Molecular Weight (calculated)
163401.0 Da
IEP (calculated)
7.530
GRAVY (calculated)
-0.150
Length
1451 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVGWALKKK GEEWRSALQE RGAEHTSFLA EEHSGQVTSL VDLADLEEGL TDRSINDSGF SSTSFPTEGE VLGQHRSVFF DPTKGLWECR HCDWTHQLIS
0101: PCRNVDFPNY QRCGQVTMEA PFDMGFLLGK LGMLLAPQGC RLPSRVKDRM HLLKEDVEDL SEYLAEMAEA EDLPLTAKRW MKEARELAYD IEDNMDMCLR
0201: PAIKTTRFIC KIGRVKIPKR LFSKRVLPRG LKQIAYTAQV PAEHGGKTRS VCKAIRVVIN CLPRRLRWYK HIMELISDFR VYIQEAIERH ERYELHCYST
0301: FRRRFVSAGC TLPTPYGGIA NMVIDGRVSE FIDSLDNDRD QQLKVLSVLG PGCLGKTALA QVLYNKFAGQ FDCTAFIQVS KRPDVVRLLR DMLTQVQGQQ
0401: PTEDSKELDL ASSIRKHLQD KRYLIIIDDI WTASTWDIIS HAFPKRNRGS RVITTTQMEE VALTCCCYHS KHIFEMRPLD HDHSRKLFFN ILFGSESDCP
0501: KELKEVTNKI VELCGGLPLA TISIASLLSS QPVIKMDLLA YLCDSLSSCL WTSPSEGTRQ VLNLSYNNLP RYLKICLLCL SMYPKGHTMW KDDLVKQWVA
0601: EGFIHTTGVQ DMEKVAASYF DELIKRRFIQ PLCIKYNNEV SSCTIDDVVH DLIADKSKEE NFNVVIDSSR KNVALSHKVR RLSLLFGDAK YAKTPENMRR
0701: SQVRSLTFFG LFESMPSISE FKLLRVLSLQ LSGYGGRGTI NLTGISDLFQ LRYLKIASDI CIQLPEHMLG LHCLETLVMD SEATAVPWDI IHLPSLSHLS
0801: LLVMTNLLHW LGSMRFVGKL NNLRDLHLTF SVPSSDYLKR SIEALGSLLS GHGNLKTLAL VNGLCHRNTV VRGASKVTVS WDGLVPPPLL EVFDWSLRSC
0901: ILSRIPKWIG KLGELHILKI AARELARDGI DALRGLPALT DLSLYLQTAA VERIVFDKGG FSVLNYFKLR CSVPCLKFEA NSMPNLQKLK LGFNAPRPLI
1001: DQHGASTAIS IGHLPCLREI YAKIGGACAD AESALATAIS NHPSNPRISV QLVDYTFDGD EITHDKNEQD EVVEEDRVGY LKKLLMSCAR AVDEKDSLAI
1101: DMTVPELGEN VSVSGKPLQR LGEYMVEGLV ARLASSGHSI YRALKWQKPH GSEMISYQRE LYAVCPYLKF GYVSANGAIA EAVRGEDMIH IIDFRISQGV
1201: QWISLIQALA ARPGGPPTVR ITCIDDSESA YVRGGGLEIL GNTLSDIARE FGLPFEFHAL DISVSGVEEG HLGVIPGEAV AVNFNLTLHQ IPDESVSAAN
1301: HRDRILRLVK QLSPKVVTIV EQELNTNTGP FTQRFAETLD YYTAIFESID VERPREPKER TKMEQHCLAR KIVNIVACEG AERVERHEVF SKWNARLTMA
1401: GFRPLPLGSR VKDNLRTLLH YYSSNYRLAE RDGVIYLGWK NRALVVSSAW H
0101: PCRNVDFPNY QRCGQVTMEA PFDMGFLLGK LGMLLAPQGC RLPSRVKDRM HLLKEDVEDL SEYLAEMAEA EDLPLTAKRW MKEARELAYD IEDNMDMCLR
0201: PAIKTTRFIC KIGRVKIPKR LFSKRVLPRG LKQIAYTAQV PAEHGGKTRS VCKAIRVVIN CLPRRLRWYK HIMELISDFR VYIQEAIERH ERYELHCYST
0301: FRRRFVSAGC TLPTPYGGIA NMVIDGRVSE FIDSLDNDRD QQLKVLSVLG PGCLGKTALA QVLYNKFAGQ FDCTAFIQVS KRPDVVRLLR DMLTQVQGQQ
0401: PTEDSKELDL ASSIRKHLQD KRYLIIIDDI WTASTWDIIS HAFPKRNRGS RVITTTQMEE VALTCCCYHS KHIFEMRPLD HDHSRKLFFN ILFGSESDCP
0501: KELKEVTNKI VELCGGLPLA TISIASLLSS QPVIKMDLLA YLCDSLSSCL WTSPSEGTRQ VLNLSYNNLP RYLKICLLCL SMYPKGHTMW KDDLVKQWVA
0601: EGFIHTTGVQ DMEKVAASYF DELIKRRFIQ PLCIKYNNEV SSCTIDDVVH DLIADKSKEE NFNVVIDSSR KNVALSHKVR RLSLLFGDAK YAKTPENMRR
0701: SQVRSLTFFG LFESMPSISE FKLLRVLSLQ LSGYGGRGTI NLTGISDLFQ LRYLKIASDI CIQLPEHMLG LHCLETLVMD SEATAVPWDI IHLPSLSHLS
0801: LLVMTNLLHW LGSMRFVGKL NNLRDLHLTF SVPSSDYLKR SIEALGSLLS GHGNLKTLAL VNGLCHRNTV VRGASKVTVS WDGLVPPPLL EVFDWSLRSC
0901: ILSRIPKWIG KLGELHILKI AARELARDGI DALRGLPALT DLSLYLQTAA VERIVFDKGG FSVLNYFKLR CSVPCLKFEA NSMPNLQKLK LGFNAPRPLI
1001: DQHGASTAIS IGHLPCLREI YAKIGGACAD AESALATAIS NHPSNPRISV QLVDYTFDGD EITHDKNEQD EVVEEDRVGY LKKLLMSCAR AVDEKDSLAI
1101: DMTVPELGEN VSVSGKPLQR LGEYMVEGLV ARLASSGHSI YRALKWQKPH GSEMISYQRE LYAVCPYLKF GYVSANGAIA EAVRGEDMIH IIDFRISQGV
1201: QWISLIQALA ARPGGPPTVR ITCIDDSESA YVRGGGLEIL GNTLSDIARE FGLPFEFHAL DISVSGVEEG HLGVIPGEAV AVNFNLTLHQ IPDESVSAAN
1301: HRDRILRLVK QLSPKVVTIV EQELNTNTGP FTQRFAETLD YYTAIFESID VERPREPKER TKMEQHCLAR KIVNIVACEG AERVERHEVF SKWNARLTMA
1401: GFRPLPLGSR VKDNLRTLLH YYSSNYRLAE RDGVIYLGWK NRALVVSSAW H
001: MEATQKHMIQ EGSSMFYHQP SSVKQMDLSV QTFDSYCTLE SSSGTKSHPC LNNKNNSSST TSFSSNESPI SQANNNNLSR FNNHSPEENN NSPLSGSSAT
101: NTNETELSLM LKDLETAMME PDVDNSYNNQ GGFGQQHGVV SSAMYRSMEM ISRGDLKGVL YECAKAVENY DLEMTDWLIS QLQQMVSVSG EPVQRLGAYM
201: LEGLVARLAS SGSSIYKALR CKDPTGPELL TYMHILYEAC PYFKFGYESA NGAIAEAVKN ESFVHIIDFQ ISQGGQWVSL IRALGARPGG PPNVRITGID
301: DPRSSFARQG GLELVGQRLG KLAEMCGVPF EFHGAALCCT EVEIEKLGVR NGEALAVNFP LVLHHMPDES VTVENHRDRL LRLVKHLSPN VVTLVEQEAN
401: TNTAPFLPRF VETMNHYLAV FESIDVKLAR DHKERINVEQ HCLAREVVNL IACEGVEREE RHEPLGKWRS RFHMAGFKPY PLSSYVNATI KGLLESYSEK
501: YTLEERDGAL YLGWKNQPLI TSCAWR
101: NTNETELSLM LKDLETAMME PDVDNSYNNQ GGFGQQHGVV SSAMYRSMEM ISRGDLKGVL YECAKAVENY DLEMTDWLIS QLQQMVSVSG EPVQRLGAYM
201: LEGLVARLAS SGSSIYKALR CKDPTGPELL TYMHILYEAC PYFKFGYESA NGAIAEAVKN ESFVHIIDFQ ISQGGQWVSL IRALGARPGG PPNVRITGID
301: DPRSSFARQG GLELVGQRLG KLAEMCGVPF EFHGAALCCT EVEIEKLGVR NGEALAVNFP LVLHHMPDES VTVENHRDRL LRLVKHLSPN VVTLVEQEAN
401: TNTAPFLPRF VETMNHYLAV FESIDVKLAR DHKERINVEQ HCLAREVVNL IACEGVEREE RHEPLGKWRS RFHMAGFKPY PLSSYVNATI KGLLESYSEK
501: YTLEERDGAL YLGWKNQPLI TSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.