Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G325800.1 | Wheat | cytosol | 91.82 | 92.07 |
| TraesCS5B01G326400.2 | Wheat | cytosol | 82.13 | 82.19 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 38.08 | 42.71 |
| TraesCS7B01G405700.1 | Wheat | cytosol, nucleus, plasma membrane | 38.08 | 40.95 |
| TraesCS6B01G099900.3 | Wheat | cytosol | 38.08 | 38.0 |
| TraesCS7B01G365100.1 | Wheat | cytosol | 25.15 | 37.97 |
| TraesCS6B01G013200.1 | Wheat | cytosol | 12.51 | 37.14 |
| TraesCS2B01G033600.1 | Wheat | cytosol | 23.37 | 36.8 |
| Os11t0462900-00 | Rice | plasma membrane | 38.21 | 35.06 |
| TraesCS1B01G003600.1 | Wheat | plasma membrane, vacuole | 23.16 | 34.64 |
| TraesCS5B01G020400.1 | Wheat | cytosol | 8.32 | 31.93 |
| TraesCS7B01G441700.1 | Wheat | cytosol, nucleus, peroxisome | 22.34 | 30.46 |
| TraesCS4B01G093200.2 | Wheat | plastid | 27.15 | 29.79 |
| TraesCS6B01G041800.1 | Wheat | cytosol | 25.09 | 28.99 |
| TraesCS5B01G344200.1 | Wheat | nucleus | 27.7 | 28.6 |
| TraesCS5B01G521200.1 | Wheat | cytosol | 26.67 | 28.59 |
| TraesCS5B01G491600.1 | Wheat | cytosol | 24.47 | 27.38 |
| TraesCS5B01G494300.1 | Wheat | cytosol | 26.25 | 26.36 |
| TraesCS2B01G030200.1 | Wheat | cytosol | 23.71 | 25.42 |
| TraesCS5B01G344100.2 | Wheat | cytosol | 16.91 | 24.24 |
| TraesCS3B01G604600.1 | Wheat | cytosol | 5.84 | 23.04 |
| TraesCS2B01G033500.1 | Wheat | cytosol | 23.57 | 21.93 |
| TraesCS2B01G625800.1 | Wheat | cytosol | 25.15 | 19.55 |
| TraesCS1B01G010000.1 | Wheat | cytosol | 23.85 | 19.01 |
| TraesCS3B01G604900.1 | Wheat | cytosol | 22.61 | 17.23 |
Protein Annotations
| MapMan:15.5.12 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:IPR005202 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PFAM:PF03514 | PRINTS:PR00364 | PFscan:PS50985 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF7 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | InterPro:TF_GRAS | EnsemblPlantsGene:TraesCS5B01G326100 | EnsemblPlants:TraesCS5B01G326100.1 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:510399797..510404751
Molecular Weight (calculated)
163865.0 Da
IEP (calculated)
7.181
GRAVY (calculated)
-0.174
Length
1455 amino acids
Sequence
(BLAST)
(BLAST)
0001: METGTNLWAL KKKGEEWRSA LQERGAEHTS FLAGEHSGQV TSLVDLADLE EGLTDRSIYD SRFSSTSFPT EGEVVGQHRS VFFDSTKGSW KCRHCDWTHQ
0101: LISPCRNGDF PNYQRCGQIT MEPPFGMGSL LGKLGMLLAP QGCRLPRRVK DRMHLLKADV EDLSAYLAEM AEAEELPLTA KRWMKEAREL AYDIEDNMDM
0201: CVRPAIKTTR FICKIGRVKI PKRLFSKRVL PRGLKQIAYT AQVPAEHGGK TRSVCKAIHV VITCFPRRLR WYKHIMELIS DFRMYIQEAI ERHERYELHC
0301: CSTFRRRFVS MGRMLPTPYG GIADMVIDGR VSEFIDSLDN DRDQQLKVVS VLGPGCLGKT ALAQVLYNKF AGRFDCTAFI RVSKRPDVVR LFREMLTQVQ
0401: GQQPTEDSKE LDLASSIREH LQDKRYLIIM DDIWAASAWD IISDAFPDGN RGSRVITTTQ IEEVALTCCC YQSEYIFEIK PLDHDHSKKL FFNRLCGSES
0501: DCPEELKEVT NKIVELCGGL PLATISIASL LSSQPVIKMD LLMYLCDSLN SYLWTSPSEG TRQVLNLSYS NLPDCLKICL LRLNMYPEGH TIWKDDVVKQ
0601: WVAEGFIHTT EGQDMEKVAA SYFDELIKRR FIQPLCVKYN NEVLSCTIHD VVHDLIADKC SEENFNVVID SSRKNVALSH KVRRLSLLFG DAKYAKTPEN
0701: IRSQVRSLTF YGLFESIPSI SEFKLLRVLN LQLSGYGGSD TVNLTGISDL FQLRYLKIAS DICIQLPEHM LGLQCLETLV MDSEATAVPW DIIHLPSLSH
0801: LSLLVMTNLL HWLGSMRFVG KLNNLRDLHL TFSVPSSDYL KRSMEALGSL LSGHGNLKTL ALVNGPCHRN AMVRDASKVT VSWDGLVPPP LLEVFDWSLR
0901: SCILPRLPKW IGKLGELRIL KIAARELARD GIDALRGLPA LTDLSLYLQT AAIERIVFDK GGFSVLNYFK LRCSVPCLKF EANSMPNLQK LKLGFNAPRP
1001: RIDQHGASTA ISIGHLPGLR EIYAKIRGAC ADAESALATA ISNHPSNPLI SVQLVDYTFD DDEITHDKNE QDEVVEEDRG GYLKKLLMSC ARAVDEKDSL
1101: AIDMTVPELG KNVSVSGKPL QRLGEYMVEG LVTRLASSGH SIYKALKWQK PNGCEVISYQ RELYAVCPYL KFGYVSANGA IAEAVRGEDM IHIIDFRISQ
1201: GVQWISLIQA LAARPGGPPT VRITCIDDSE SAYARGGGLE ILGNTLSDIA REFALPFEFH ALDISVSEVE EGHLGVIPGE AVAVNFNLTL HQIPDESVSA
1301: ANHRDRILRL VKRLSPKVVT IVEQELNTNT GPFMQRFAET LDYYTAIFES IDVERERPRK PKERTKMEQY CLARKIVNIV ACEGAERVER HEVFGKWKAH
1401: LMMAGFRPSP LGSQVKDNLR TLLQYYSSNY KLAEGDGVLY LGWKNRPLVV SSAWH
0101: LISPCRNGDF PNYQRCGQIT MEPPFGMGSL LGKLGMLLAP QGCRLPRRVK DRMHLLKADV EDLSAYLAEM AEAEELPLTA KRWMKEAREL AYDIEDNMDM
0201: CVRPAIKTTR FICKIGRVKI PKRLFSKRVL PRGLKQIAYT AQVPAEHGGK TRSVCKAIHV VITCFPRRLR WYKHIMELIS DFRMYIQEAI ERHERYELHC
0301: CSTFRRRFVS MGRMLPTPYG GIADMVIDGR VSEFIDSLDN DRDQQLKVVS VLGPGCLGKT ALAQVLYNKF AGRFDCTAFI RVSKRPDVVR LFREMLTQVQ
0401: GQQPTEDSKE LDLASSIREH LQDKRYLIIM DDIWAASAWD IISDAFPDGN RGSRVITTTQ IEEVALTCCC YQSEYIFEIK PLDHDHSKKL FFNRLCGSES
0501: DCPEELKEVT NKIVELCGGL PLATISIASL LSSQPVIKMD LLMYLCDSLN SYLWTSPSEG TRQVLNLSYS NLPDCLKICL LRLNMYPEGH TIWKDDVVKQ
0601: WVAEGFIHTT EGQDMEKVAA SYFDELIKRR FIQPLCVKYN NEVLSCTIHD VVHDLIADKC SEENFNVVID SSRKNVALSH KVRRLSLLFG DAKYAKTPEN
0701: IRSQVRSLTF YGLFESIPSI SEFKLLRVLN LQLSGYGGSD TVNLTGISDL FQLRYLKIAS DICIQLPEHM LGLQCLETLV MDSEATAVPW DIIHLPSLSH
0801: LSLLVMTNLL HWLGSMRFVG KLNNLRDLHL TFSVPSSDYL KRSMEALGSL LSGHGNLKTL ALVNGPCHRN AMVRDASKVT VSWDGLVPPP LLEVFDWSLR
0901: SCILPRLPKW IGKLGELRIL KIAARELARD GIDALRGLPA LTDLSLYLQT AAIERIVFDK GGFSVLNYFK LRCSVPCLKF EANSMPNLQK LKLGFNAPRP
1001: RIDQHGASTA ISIGHLPGLR EIYAKIRGAC ADAESALATA ISNHPSNPLI SVQLVDYTFD DDEITHDKNE QDEVVEEDRG GYLKKLLMSC ARAVDEKDSL
1101: AIDMTVPELG KNVSVSGKPL QRLGEYMVEG LVTRLASSGH SIYKALKWQK PNGCEVISYQ RELYAVCPYL KFGYVSANGA IAEAVRGEDM IHIIDFRISQ
1201: GVQWISLIQA LAARPGGPPT VRITCIDDSE SAYARGGGLE ILGNTLSDIA REFALPFEFH ALDISVSEVE EGHLGVIPGE AVAVNFNLTL HQIPDESVSA
1301: ANHRDRILRL VKRLSPKVVT IVEQELNTNT GPFMQRFAET LDYYTAIFES IDVERERPRK PKERTKMEQY CLARKIVNIV ACEGAERVER HEVFGKWKAH
1401: LMMAGFRPSP LGSQVKDNLR TLLQYYSSNY KLAEGDGVLY LGWKNRPLVV SSAWH
001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.