Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G013200.1 | Wheat | cytosol | 30.58 | 78.57 |
| TraesCS7B01G365100.1 | Wheat | cytosol | 50.99 | 66.6 |
| HORVU7Hr1G120020.4 | Barley | plastid | 57.03 | 56.67 |
| TraesCS2B01G033600.1 | Wheat | cytosol | 33.68 | 45.89 |
| TraesCS4B01G093200.2 | Wheat | plastid | 36.78 | 34.92 |
| TraesCS1B01G003600.1 | Wheat | plasma membrane, vacuole | 26.61 | 34.43 |
| TraesCS5B01G020400.1 | Wheat | cytosol | 10.01 | 33.25 |
| TraesCS5B01G521200.1 | Wheat | cytosol | 35.35 | 32.79 |
| TraesCS7B01G441700.1 | Wheat | cytosol, nucleus, peroxisome | 26.69 | 31.49 |
| TraesCS5B01G344200.1 | Wheat | nucleus | 30.82 | 27.54 |
| TraesCS2B01G033500.1 | Wheat | cytosol | 33.2 | 26.73 |
| TraesCS2B01G030200.1 | Wheat | cytosol | 28.28 | 26.23 |
| TraesCS7B01G405700.1 | Wheat | cytosol, nucleus, plasma membrane | 28.12 | 26.16 |
| TraesCS5B01G326400.2 | Wheat | cytosol | 30.1 | 26.07 |
| TraesCS5B01G491600.1 | Wheat | cytosol | 26.85 | 26.0 |
| TraesCS5B01G344100.2 | Wheat | cytosol | 20.49 | 25.42 |
| TraesCS5B01G494300.1 | Wheat | cytosol | 29.07 | 25.26 |
| TraesCS3B01G604600.1 | Wheat | cytosol | 7.39 | 25.2 |
| TraesCS6B01G099900.3 | Wheat | cytosol | 29.15 | 25.17 |
| TraesCS5B01G326100.1 | Wheat | cytosol | 28.99 | 25.09 |
| TraesCS1B01G010000.1 | Wheat | cytosol | 34.95 | 24.11 |
| TraesCS2B01G625800.1 | Wheat | cytosol | 28.12 | 18.91 |
| TraesCS3B01G604900.1 | Wheat | cytosol | 24.38 | 16.07 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G041800.1 | EnsemblPlantsGene:TraesCS6B01G041800 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR013083 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF1 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:-:25806609..25820562
Molecular Weight (calculated)
142805.0 Da
IEP (calculated)
7.772
GRAVY (calculated)
-0.190
Length
1259 amino acids
Sequence
(BLAST)
(BLAST)
0001: MELSPISASL GAMGSLPRKL DELLATKHRA LRGVLMDDID QLRAHLCILY NFMLKLSDAP QDPPMFVRYW MKDVRELSYD MEDFADQFVH AHGRAKIPRA
0101: NHRKNKTRSR VKIDRLPKRH KWRPGITHKI SEFRSRAYEA IQRYWRYKFD DCAANPRYSP IGHGRPTILP HPDDLVGIEG PSNELERWLI NGEEQLKVVS
0201: IVGGAGIGKT TLALKLWGTL RGQFECGAFV RTAQKPDMRR ILRNILLQVR PHQSPNHGEM RHLINDLREY LQDKRYFLII DDLWATSVWD VVSRAFPKGG
0301: CSRIITTTES MEVALACCCF CPEHIFKMEP LSDNDSEKLL LQRILVSGNQ SPQQFEDVIP QIIRSCGGLP LAIIIVARIL ASQPEKLDQW GSAQNSFHSI
0401: FGTNPNKEGF MGQILDICFN SLPHYLKTCL LYLSTYPEGY LFSKNDLMKQ WVAEGLICAN KGEDMEEVAG SYFGELVSMG LIQVMDITND FEFLSYSVHQ
0501: LVLDLITYKS IEDNFITMVD YSQTTTPLTD KIRRLSLHFG SAAYATTPAS TRLSQARSLF FSGLFTSMPL FIFFKLLRVL ILHIWDDTGA KMLNVTGICE
0601: LFWLRYLQVT CNVTVKLPDK IEAMKHLETL EINARILDVP PDIVRLSSLL HLCLRGANLP NGIGCIRSLR TLMYFDIGNS SEDNLWGLGE LTNLQDLHLT
0701: YSSSPSSEHL KRNLVALASS LRKLCNLKSF TLAPGIAGTV VLFDGSSSMP TPMFLEKLEL LPPICIFSRL PRWIGQLHKT CIMKVAVREL PTIDIAILAG
0801: LPSLTVLSLS VHAAPEGRVV FNDREFPVLK YFKFRCGVLC MHFMPGAMPN LQRLKLGFNT HIGEKYDNML AGIEHLLNLH DIAGKIGATT ESEWSAAESA
0901: INNAINKHPR FPRRNLQWVD PVEEKCCPSE KHHLRQEKGT VGEKHGVLEK AIDMNKHADT GLSQPPNLPS NVASGRLESG SLVDELQEFS APSLPCKVSC
1001: PLCKETLQRE ILDLHKSEQC TQRLLVCQYC EYQLPAIELH EHQAVCVLAT VFCETCKKNI RYREWLGHEM QCYDSNDSAE LSRLPQLPDL PSTVASGRLE
1101: SGMVLQESKN ESSSAPSWPL KVWRSAEQER WMPLPYGGEA DSSAVTECRH AHKLILKILG AAATARQNRL ECENLAQCLH EINALFPDLR LDREMAQPLA
1201: KLNQRLMEAH ELVVACQSWK FIFARGVNAE RLRDVRRRIL EFHMFVKEKE RLWAKENTR
0101: NHRKNKTRSR VKIDRLPKRH KWRPGITHKI SEFRSRAYEA IQRYWRYKFD DCAANPRYSP IGHGRPTILP HPDDLVGIEG PSNELERWLI NGEEQLKVVS
0201: IVGGAGIGKT TLALKLWGTL RGQFECGAFV RTAQKPDMRR ILRNILLQVR PHQSPNHGEM RHLINDLREY LQDKRYFLII DDLWATSVWD VVSRAFPKGG
0301: CSRIITTTES MEVALACCCF CPEHIFKMEP LSDNDSEKLL LQRILVSGNQ SPQQFEDVIP QIIRSCGGLP LAIIIVARIL ASQPEKLDQW GSAQNSFHSI
0401: FGTNPNKEGF MGQILDICFN SLPHYLKTCL LYLSTYPEGY LFSKNDLMKQ WVAEGLICAN KGEDMEEVAG SYFGELVSMG LIQVMDITND FEFLSYSVHQ
0501: LVLDLITYKS IEDNFITMVD YSQTTTPLTD KIRRLSLHFG SAAYATTPAS TRLSQARSLF FSGLFTSMPL FIFFKLLRVL ILHIWDDTGA KMLNVTGICE
0601: LFWLRYLQVT CNVTVKLPDK IEAMKHLETL EINARILDVP PDIVRLSSLL HLCLRGANLP NGIGCIRSLR TLMYFDIGNS SEDNLWGLGE LTNLQDLHLT
0701: YSSSPSSEHL KRNLVALASS LRKLCNLKSF TLAPGIAGTV VLFDGSSSMP TPMFLEKLEL LPPICIFSRL PRWIGQLHKT CIMKVAVREL PTIDIAILAG
0801: LPSLTVLSLS VHAAPEGRVV FNDREFPVLK YFKFRCGVLC MHFMPGAMPN LQRLKLGFNT HIGEKYDNML AGIEHLLNLH DIAGKIGATT ESEWSAAESA
0901: INNAINKHPR FPRRNLQWVD PVEEKCCPSE KHHLRQEKGT VGEKHGVLEK AIDMNKHADT GLSQPPNLPS NVASGRLESG SLVDELQEFS APSLPCKVSC
1001: PLCKETLQRE ILDLHKSEQC TQRLLVCQYC EYQLPAIELH EHQAVCVLAT VFCETCKKNI RYREWLGHEM QCYDSNDSAE LSRLPQLPDL PSTVASGRLE
1101: SGMVLQESKN ESSSAPSWPL KVWRSAEQER WMPLPYGGEA DSSAVTECRH AHKLILKILG AAATARQNRL ECENLAQCLH EINALFPDLR LDREMAQPLA
1201: KLNQRLMEAH ELVVACQSWK FIFARGVNAE RLRDVRRRIL EFHMFVKEKE RLWAKENTR
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.