Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G113040.5 | Barley | cytosol | 87.0 | 87.54 |
| TraesCS5B01G494300.1 | Wheat | cytosol | 58.77 | 52.73 |
| TraesCS1B01G003600.1 | Wheat | plasma membrane, vacuole | 30.62 | 40.9 |
| TraesCS7B01G441700.1 | Wheat | cytosol, nucleus, peroxisome | 31.54 | 38.43 |
| OQU83390 | Sorghum | nucleus | 27.92 | 36.23 |
| Zm00001d048637_P001 | Maize | cytosol | 23.08 | 36.19 |
| TraesCS7B01G365100.1 | Wheat | cytosol | 25.54 | 34.44 |
| TraesCS2B01G033600.1 | Wheat | cytosol | 23.23 | 32.68 |
| TraesCS2B01G030200.1 | Wheat | cytosol | 30.92 | 29.62 |
| TraesCS5B01G344200.1 | Wheat | nucleus | 29.46 | 27.18 |
| TraesCS6B01G041800.1 | Wheat | cytosol | 26.0 | 26.85 |
| TraesCS5B01G020400.1 | Wheat | cytosol | 7.77 | 26.65 |
| TraesCS4B01G093200.2 | Wheat | plastid | 26.92 | 26.4 |
| TraesCS5B01G344100.2 | Wheat | cytosol | 20.46 | 26.21 |
| TraesCS6B01G013200.1 | Wheat | cytosol | 9.69 | 25.71 |
| TraesCS5B01G521200.1 | Wheat | cytosol | 26.08 | 24.98 |
| TraesCS5B01G326400.2 | Wheat | cytosol | 27.77 | 24.83 |
| TraesCS5B01G326100.1 | Wheat | cytosol | 27.38 | 24.47 |
| TraesCS2B01G625800.1 | Wheat | cytosol | 34.92 | 24.25 |
| TraesCS7B01G405700.1 | Wheat | cytosol, nucleus, plasma membrane | 24.77 | 23.8 |
| TraesCS6B01G099900.3 | Wheat | cytosol | 26.54 | 23.66 |
| TraesCS3B01G604600.1 | Wheat | cytosol | 6.54 | 23.04 |
| TraesCS3B01G604900.1 | Wheat | cytosol | 28.62 | 19.48 |
| TraesCS2B01G033500.1 | Wheat | cytosol | 22.77 | 18.93 |
| TraesCS1B01G010000.1 | Wheat | cytosol | 23.77 | 16.93 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.40.50.300 | Gene3D:3.60.40.10 | Gene3D:3.80.10.10 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0043169 | GO:GO:0043531 |
| InterPro:IPR001932 | InterPro:IPR032675 | InterPro:IPR036457 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00481 | PFAM:PF00931 | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PRINTS:PR00364 |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF1 | SMART:SM00332 | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS5B01G491600 | EnsemblPlants:TraesCS5B01G491600.1 | TIGR:cd00143 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:659813764..659821171
Molecular Weight (calculated)
145112.0 Da
IEP (calculated)
7.262
GRAVY (calculated)
-0.101
Length
1300 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQSGAGDGVA VGRSSPLGTT IIGIISKRKQ RLPQIALDFS HLMARLDDAR ERCKSFQLAP ETAIKPDHGQ ASTSRHTPDL PLDLPVSAVS ISNAHVNTAG
0101: CSLVGVEQPM KKLVHLLAFG EDNQKQLKVI PISGSAGVGK TTVARTIYHQ YGGEFQCRAF VRVSRNPDMR RLLTSILSQT KAPWTHAFSH AQDLIDSIIE
0201: HLQGKSYFIV VDDLWASSEW DIISRAFPYG DRCSRILTTT QVEDVALACS RYESEYIFEM RPLNYGESQK LFFNNVFGSE CEGACPKEFE VVADRIIRKC
0301: GGLPLSIVSI ASLLLPSKWN PAMWEKVESS LPSTLRTDPT SQGMKDVIIL IYNKLPLHLK ACLLYLGMYP EGRTIMKDDL VKQWVAESLV SDTDYGCFDE
0401: LVRRGMIQPV DTNYDGEVLS CTVNHMVMDL IRYKSIEENF IIVVKYFEST LLLPDKVRRL SLQFGGSKSA KIPESIRVSQ VRSLLFCGSS RCVPSIPDYG
0501: ILRVLILHIW ADQDQMSFDL TRINELFRLR YLMVECNITI NLPDKIKGLQ YLETLQLDGR LSAVPSDIGH LENLRHLCLP SEANVRDLDR LTNLQDLHLT
0601: LSTAHPIENL EVTMKCMGSI LHKLNNLKSI ILASAGSFPI NTSSLSISCD GLSNVSPVLA HLERLELLPQ VCIFPSLPKW FKTLDKLCTL KIAIRELSNS
0701: DMDIVKGLPA LSALWLYIQT APTETIVFGK SGFSALKYFK LRCSEPLLKF EADAMPNLRK LKLVFSVQEV QQHRVVPICI EHLAGLKEIS AKIGGAGAAG
0801: TESALRISVS NDPKNPKINC QLVNWNFYAE DRIIAIPDQA AIIIEERGEI LEENTEYEYK GEDGDRQADS GTSTLPESSP SFPLRPTGQL YGQRLLSVWS
0901: RARHTLKAVP RTLKARPHTL KPASEGHDGL LWWYNLVPCN AGELSMAYVQ ANRLMEDHCR VDSSPTLGTF VGIFDGHGGA EAARFTAEHL FPNIQSEATS
1001: SWQGVTEETI RKAFLDTDES FIAHVEKQWL VKPQLAAVGS CCLVGVVHQR TLFVANLGDS RAVLGKVGLN GKIDPVQLTT EHVASDESVR QELRDQHPDD
1101: PHIVVLKHGV WRVRGFIQVL LILMFGFMLQ YVHTCSALTQ WMMQVSRTIG DAYLKHEHFN REPLHSKFRL REPFSRPILS ANPSIMSHSL QPSDRFIIFA
1201: SDGLWEHLSN ETAVKIVHKH GRTGIARRLI EAALQEAGKK RELTLKDIMK IESGVRRHFH DDITVVVLFI DHGLSAKDHA QESRALSISV PSGLGDLAWA
0101: CSLVGVEQPM KKLVHLLAFG EDNQKQLKVI PISGSAGVGK TTVARTIYHQ YGGEFQCRAF VRVSRNPDMR RLLTSILSQT KAPWTHAFSH AQDLIDSIIE
0201: HLQGKSYFIV VDDLWASSEW DIISRAFPYG DRCSRILTTT QVEDVALACS RYESEYIFEM RPLNYGESQK LFFNNVFGSE CEGACPKEFE VVADRIIRKC
0301: GGLPLSIVSI ASLLLPSKWN PAMWEKVESS LPSTLRTDPT SQGMKDVIIL IYNKLPLHLK ACLLYLGMYP EGRTIMKDDL VKQWVAESLV SDTDYGCFDE
0401: LVRRGMIQPV DTNYDGEVLS CTVNHMVMDL IRYKSIEENF IIVVKYFEST LLLPDKVRRL SLQFGGSKSA KIPESIRVSQ VRSLLFCGSS RCVPSIPDYG
0501: ILRVLILHIW ADQDQMSFDL TRINELFRLR YLMVECNITI NLPDKIKGLQ YLETLQLDGR LSAVPSDIGH LENLRHLCLP SEANVRDLDR LTNLQDLHLT
0601: LSTAHPIENL EVTMKCMGSI LHKLNNLKSI ILASAGSFPI NTSSLSISCD GLSNVSPVLA HLERLELLPQ VCIFPSLPKW FKTLDKLCTL KIAIRELSNS
0701: DMDIVKGLPA LSALWLYIQT APTETIVFGK SGFSALKYFK LRCSEPLLKF EADAMPNLRK LKLVFSVQEV QQHRVVPICI EHLAGLKEIS AKIGGAGAAG
0801: TESALRISVS NDPKNPKINC QLVNWNFYAE DRIIAIPDQA AIIIEERGEI LEENTEYEYK GEDGDRQADS GTSTLPESSP SFPLRPTGQL YGQRLLSVWS
0901: RARHTLKAVP RTLKARPHTL KPASEGHDGL LWWYNLVPCN AGELSMAYVQ ANRLMEDHCR VDSSPTLGTF VGIFDGHGGA EAARFTAEHL FPNIQSEATS
1001: SWQGVTEETI RKAFLDTDES FIAHVEKQWL VKPQLAAVGS CCLVGVVHQR TLFVANLGDS RAVLGKVGLN GKIDPVQLTT EHVASDESVR QELRDQHPDD
1101: PHIVVLKHGV WRVRGFIQVL LILMFGFMLQ YVHTCSALTQ WMMQVSRTIG DAYLKHEHFN REPLHSKFRL REPFSRPILS ANPSIMSHSL QPSDRFIIFA
1201: SDGLWEHLSN ETAVKIVHKH GRTGIARRLI EAALQEAGKK RELTLKDIMK IESGVRRHFH DDITVVVLFI DHGLSAKDHA QESRALSISV PSGLGDLAWA
001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
Arabidopsis Description
PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.