Factsheet for HORVU5Hr1G113040.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G491600.1	Wheat	cytosol	87.54	87.0
HORVU6Hr1G090910.3	Barley	cytosol	63.47	59.99
HORVU0Hr1G022390.1	Barley	cytosol	12.62	44.29
HORVU7Hr1G002930.12	Barley	plasma membrane, vacuole	35.91	37.54
Zm00001d048637_P001	Maize	cytosol	23.14	36.07
OQU83390	Sorghum	nucleus	27.79	35.83
HORVU7Hr1G116350.2	Barley	cytosol	32.2	35.65
HORVU7Hr1G000020.2	Barley	cytosol	18.34	33.62
HORVU5Hr1G001060.1	Barley	cytosol, plastid	27.63	31.82
HORVU7Hr1G000690.5	Barley	cytosol	25.54	31.49
HORVU1Hr1G004040.1	Barley	plastid	27.48	31.0
HORVU1Hr1G004060.1	Barley	plastid	27.48	31.0
HORVU7Hr1G000050.1	Barley	cytosol	5.19	29.78
HORVU7Hr1G028970.1	Barley	endoplasmic reticulum	25.7	28.79
HORVU7Hr1G000040.14	Barley	cytosol	25.77	27.91
HORVU7Hr1G000080.1	Barley	cytosol	6.66	27.83
HORVU7Hr1G000110.2	Barley	nucleus	12.07	27.13
HORVU5Hr1G122180.1	Barley	cytosol	26.39	26.68
HORVU3Hr1G037800.3	Barley	nucleus, plastid	19.97	25.96
HORVU7Hr1G120020.4	Barley	plastid	25.31	25.81
HORVU5Hr1G099940.3	Barley	mitochondrion, nucleus	18.89	25.21
HORVU5Hr1G118880.7	Barley	cytosol	24.92	24.69
HORVU5Hr1G085900.5	Barley	nucleus	29.41	24.16
HORVU7Hr1G000320.2	Barley	cytosol	26.01	22.12
HORVU2Hr1G003540.3	Barley	plasma membrane	23.22	19.43
HORVU3Hr1G010980.1	Barley	cytosol	27.4	18.76
HORVU7Hr1G000090.1	Barley	cytosol	4.02	16.15
HORVU7Hr1G000340.1	Barley	nucleus	0.7	4.15

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.40.50.300	Gene3D:3.60.40.10	Gene3D:3.80.10.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0043531
GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G113040	EnsemblPlants:HORVU5Hr1G113040.5	InterPro:IPR001932	InterPro:IPR032675	InterPro:IPR036457
InterPro:LRR_dom_sf	UniProt:M0XYV4	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00481	PFAM:PF00931
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PRINTS:PR00364	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR43889	PANTHER:PTHR43889:SF1	SMART:SM00332	SUPFAM:SSF52058	SUPFAM:SSF52540	SUPFAM:SSF81606
TMHMM:TMhelix	UniParc:UPI000296B67B	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:640813068..640819636

Molecular Weight (calculated)

144059.0 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.114

Length

1292 amino acids

Sequence
(BLAST)

0001: MQSGAGTGDG VAVGRSSLLS WIINKRKQRL PQIAQDFSHL MARLDDARER CKSFQFAPET AIKPDHGQAS TSRHTPELPL DLPVSAVSIS NVHVNTAGCS
0101: LVGVEQPMKK LVNLLAFGDD NQKQLKVISI SGSAGVGKTT VARTIYHRYG REFQCRAFVR VSRNPDMRRL LTSVLSQTKA PRTHSFSDAQ DLIDSIIKHL
0201: QGKSYFIVVD DLWASSEWDI ISRAFPYGDR CSRILTTTQV EDVALACSGY ETEYIFEMRP LNDGEARKLF FNNVFGSESE DACPKEFEVV ADRIIRKCSG
0301: LPLSIVSIAS LLLPSKWNPA MWEKVESSLP SILRIDPTSQ GMKDVLILIY NKLPIHLKTC LLYLGMYPEG CTITKDDLVK QWVAESLVSD TDYGCFDELV
0401: RRGMIQPVDT NYDGEVLSCT VNHMVMDLIR YKSIEDNFII VVKYFESTLL LPDKVRRLSL QFGGSKSAKI PESIRMSQVR SLLFCGSSRC VPSIPDYCIL
0501: QVLILHIWAD QDQMSFDLTR INELFRLRYL MVECNITINL PDKIKGLQYL ETLQLDGRLS SVPSDIGHLE NLRHLCLPSQ PNVRDLDRLT NLQDLHLTLS
0601: TAQPIENLEV TLKYLGSILH KLNNLKSIIM AAAGSFPVNT SSVSISCDGL SSVSPVLAHL EKLELLPRVC IFPSLPRWFK TLDKLCTLKI AIRELSNSEM
0701: DIVKGLPALS ALLLYIQIAP AERIVFGKSG FSALKYFKLR CTEPLLKFEA GAMPNLRKLK LLFSVQEVQQ HGVVPICIEH LAGLKEISAK IGGVGAAGTE
0801: SALRISVSND SKNPKINGQL VNWNFCADED RIITTPDQAV VIMEEQGEIL ENTDYGYKGD DGDPQPDSGI SMLPGASPSF PQRPTDRLYG QKLLSAWSRA
0901: RRTLKARPQT LKAGNEGHNG LLRWHNLAQC NAGELSMAYV QANNLMEDHC RVESSPTLGT FVGVFDGHGG NEAARFTSEH LFPNLQSEAT SNWQGVTDET
1001: IRKAFLDTDE SYIAHVEKQW SVKPQLAAVG SCCLVGIVCQ RTLFIANLGN SRAVLGKADL SGQISSVQLS TEHNASDESV RQELWAQHPD DPHIVVFKDN
1101: VWRVKGIIQV VLILMFGSVL LYVYSCSVLT RWMMQVSRTI GDAYLKHQRF NREPLHSMFK LREPFSRPIL SASPSIMSHS LQPSDRFIIF ASDGLWEHLS
1201: NETAVKIVHK HGRTGIAKRL VKAALQEAAR KRDMRFSDLK KIDRGVRRHF HDDITVVVLF IDHGGLSLKD HSQESLALSI SAPSCIGDLA WS

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.