Factsheet for HORVU5Hr1G099940.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G022390.1	Barley	cytosol	16.63	43.75
TraesCS5B01G344200.1	Wheat	nucleus	55.17	37.9
Os11t0686400-00	Rice	cytosol	38.43	37.88
HORVU7Hr1G000020.2	Barley	cytosol	26.86	36.88
TraesCS5A01G344100.1	Wheat	nucleus	55.99	36.57
HORVU5Hr1G085900.5	Barley	nucleus	55.89	34.39
KXG35388	Sorghum	cytosol	38.22	33.51
KXG24023	Sorghum	nucleus	38.95	32.42
Os11t0684100-01	Rice	cytosol	39.36	31.75
HORVU7Hr1G000110.2	Barley	nucleus	17.67	29.74
HORVU7Hr1G000090.1	Barley	cytosol	8.88	26.71
HORVU3Hr1G037800.3	Barley	nucleus, plastid	27.38	26.66
HORVU5Hr1G001060.1	Barley	cytosol, plastid	30.48	26.29
HORVU1Hr1G004040.1	Barley	plastid	30.48	25.76
HORVU1Hr1G004060.1	Barley	plastid	30.48	25.76
Os11t0686900-00	Rice	cytosol, peroxisome, plasma membrane	21.38	25.4
HORVU7Hr1G028970.1	Barley	endoplasmic reticulum	29.55	24.8
HORVU7Hr1G000690.5	Barley	cytosol	26.45	24.43
EER98716	Sorghum	nucleus	38.33	23.42
HORVU5Hr1G118880.7	Barley	cytosol	29.75	22.09
HORVU7Hr1G116350.2	Barley	cytosol	26.55	22.02
HORVU7Hr1G002930.12	Barley	plasma membrane, vacuole	27.89	21.84
HORVU5Hr1G122180.1	Barley	cytosol	28.31	21.44
HORVU7Hr1G120020.4	Barley	plastid	27.89	21.31
HORVU6Hr1G090910.3	Barley	cytosol	27.58	19.53
HORVU5Hr1G113040.5	Barley	cytosol	25.21	18.89
Os05t0479700-00	Rice	cytosol	13.12	18.43
TraesCS5B01G344100.2	Wheat	cytosol	19.32	18.42
HORVU7Hr1G000040.14	Barley	cytosol	22.42	18.19
HORVU7Hr1G000320.2	Barley	cytosol	27.79	17.71
HORVU2Hr1G003540.3	Barley	plasma membrane	25.41	15.93
HORVU3Hr1G010980.1	Barley	cytosol	24.48	12.56
Os11t0685600-00	Rice	cytosol, nucleus, peroxisome	2.38	5.91
HORVU7Hr1G000050.1	Barley	cytosol	0.31	1.33
HORVU7Hr1G000080.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G000340.1	Barley	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.8.430	MapMan:15.5.15	Gene3D:3.30.160.60	Gene3D:3.40.50.300	UniProt:A0A287SHH2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0043531	EnsemblPlantsGene:HORVU5Hr1G099940	EnsemblPlants:HORVU5Hr1G099940.3
InterPro:IPR013087	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR43889	PANTHER:PTHR43889:SF1	SMART:SM00355	SUPFAM:SSF52058	SUPFAM:SSF52540
SUPFAM:SSF57667	UniParc:UPI000B481F35	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:611042650..611061898

Molecular Weight (calculated)

107186.0 Da

IEP (calculated)

7.662

GRAVY (calculated)

-0.371

Length

968 amino acids

Sequence
(BLAST)

001: MEGGRKTKTY RPQSPPPPPR PPFAAMGWGA DKGQLDRELG GAAAAAPDRP GMPPNPTEPE AAAASAPTKK KWTLPGKRDE DVEVVALSPG TLMASNSRFI
101: CEVCGQGFQR DQNLQLHRRG HNLPWRLRQR GPGAAPPLRR VYVCPEPGCV HHSPAHALGD LMGIKKHFCR KHGEKRWACP RCGKRYAVQA DLKGHAKICS
201: TREYRCDCGT LFTRRDSFVT HRAFCDALVD VDKTAGSVLT VEENVDKDES ETSAVDKDES ETSAVAKVDE PQPQPILPQV QQPDLDEQSM EVPVCALADA
301: MFRLPAKLDR LLASHGHNLP RGAKEEIPLI KQDLQETVAS VQEYDDSGGD GRSMMAKCLT KEVRELSYDM EDTADQYEHA ACIRKGIAPR RKKYKVSRRR
401: SKATSGLQEK LKWRLWMANK IRELSLRSQE ALRRCSLFNH LGSNVITDLA IGGTSNNACP RRVVSFGSWH PMPYVCMDEH VNKLESLLGK DGEQKLKVVC
501: LVGSGGIGKT TLAKELYRRI KGQFECQAFV RTSRKPDVRS LLSSMLSQIQ PHHSTHNWKV HSLIADIRTH LQDKRYLIVI DDVWATQTWD IIVNALPDGN
601: LCSGILMTTE VDDVALKCCG YEPKYVHTMK PLGHDDSSKL FFSTAFGAQH DCPPELSEVA NNIIRKCDGL PLAVVTVAGL LVNQGKPEQW DYVNKSLGYG
701: LRTNPNSEGM KQVLNLSYNN LPQHLKACMM YLSIYEENYM IWKDDLLKQW IAEGLIRANG EKDMEEISRI CFDELVNSRM IQPVHINDND DVLSCTVHHM
801: VLDFIKHKSL EENFVTAVDH CQTTAWLADK VRRLSLHFGN AEAMPPTNMI LSQVRTLAFF GAIKCLPSIV EFGFLQILIL HLWGNDESIS VDLTGISELF
901: RLKYLHVTCN GTLELEVPHN QMRGLQYLET LKIDARVSAV PLEIVHVPCL LHLSLXXXXX XXXXXXCT

Best Arabidopsis Sequence Match ( AT1G03840.1 )
(BLAST)

001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI

Arabidopsis Description

MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.