Factsheet for HORVU7Hr1G000340.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G000040.14	Barley	cytosol	81.11	14.75
HORVU7Hr1G000320.2	Barley	cytosol	100.0	14.29
HORVU7Hr1G000080.1	Barley	cytosol	3.69	2.59
HORVU5Hr1G122180.1	Barley	cytosol	6.91	1.17
HORVU0Hr1G022390.1	Barley	cytosol	1.38	0.82
HORVU3Hr1G010980.1	Barley	cytosol	6.45	0.74
HORVU5Hr1G113040.5	Barley	cytosol	4.15	0.7
HORVU2Hr1G003540.3	Barley	plasma membrane	4.61	0.65
HORVU5Hr1G085900.5	Barley	nucleus	4.15	0.57
HORVU7Hr1G116350.2	Barley	cytosol	2.76	0.51
HORVU7Hr1G120020.4	Barley	plastid	2.3	0.39
HORVU7Hr1G002930.12	Barley	plasma membrane, vacuole	1.84	0.32
HORVU6Hr1G090910.3	Barley	cytosol	1.84	0.29
HORVU3Hr1G037800.3	Barley	nucleus, plastid	0.92	0.2
HORVU7Hr1G000690.5	Barley	cytosol	0.92	0.19
HORVU1Hr1G004060.1	Barley	plastid	0.46	0.09
HORVU1Hr1G004040.1	Barley	plastid	0.46	0.09
HORVU5Hr1G118880.7	Barley	cytosol	0.46	0.08
HORVU7Hr1G000020.2	Barley	cytosol	0.0	0.0
HORVU7Hr1G000050.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G099940.3	Barley	mitochondrion, nucleus	0.0	0.0
HORVU7Hr1G000090.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G000110.2	Barley	nucleus	0.0	0.0
HORVU5Hr1G001060.1	Barley	cytosol, plastid	0.0	0.0
HORVU7Hr1G028970.1	Barley	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G000340.1	EnsemblPlantsGene:HORVU7Hr1G000340	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133	PFAM:PF01344
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000294C8D1	UniProt:M0WAR1	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:-:543213..543866

Molecular Weight (calculated)

24053.3 Da

IEP (calculated)

4.449

GRAVY (calculated)

-0.389

Length

217 amino acids

Sequence
(BLAST)

001: MNTPRTLFGS ASVGEKAYVT GGVDPSSANV LSTAEMYDSE THTWTPLPSM NRARYGCSGA FMDGKFYVIG GLSSSHEVLT CGEEYDLNLR SWRVIDNMSQ
101: GLNETNDGDP PLLAVVNNEL YTADYSENND LKRYDKLDNK WITLGKLPVQ SKDKDGWDLG FRACGDRLIV IGRPNDSIDE KVVELHSWTP DGEPPVWDLF
201: ATRRLMGIQI LCAVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.