Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G000690.5 | Barley | cytosol | 94.61 | 51.91 |
| HORVU7Hr1G000090.1 | Barley | cytosol | 21.57 | 38.51 |
| HORVU7Hr1G000020.2 | Barley | cytosol | 45.04 | 36.74 |
| HORVU0Hr1G022390.1 | Barley | cytosol | 21.91 | 34.24 |
| HORVU3Hr1G037800.3 | Barley | nucleus, plastid | 46.43 | 26.86 |
| HORVU5Hr1G122180.1 | Barley | cytosol | 49.04 | 22.07 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 44.7 | 19.82 |
| HORVU7Hr1G000320.2 | Barley | cytosol | 48.35 | 18.3 |
| HORVU7Hr1G028970.1 | Barley | endoplasmic reticulum | 35.65 | 17.78 |
| HORVU7Hr1G000040.14 | Barley | cytosol | 36.7 | 17.69 |
| HORVU5Hr1G099940.3 | Barley | mitochondrion, nucleus | 29.74 | 17.67 |
| HORVU5Hr1G001060.1 | Barley | cytosol, plastid | 32.52 | 16.67 |
| HORVU5Hr1G118880.7 | Barley | cytosol | 35.65 | 15.72 |
| HORVU1Hr1G004040.1 | Barley | plastid | 30.78 | 15.46 |
| HORVU1Hr1G004060.1 | Barley | plastid | 30.78 | 15.46 |
| HORVU7Hr1G120020.4 | Barley | plastid | 32.52 | 14.76 |
| Os11t0462900-00 | Rice | plasma membrane | 40.52 | 14.69 |
| HORVU7Hr1G002930.12 | Barley | plasma membrane, vacuole | 31.3 | 14.56 |
| HORVU7Hr1G116350.2 | Barley | cytosol | 27.83 | 13.71 |
| HORVU6Hr1G090910.3 | Barley | cytosol | 29.74 | 12.51 |
| HORVU5Hr1G113040.5 | Barley | cytosol | 27.13 | 12.07 |
| HORVU5Hr1G085900.5 | Barley | nucleus | 31.65 | 11.57 |
| HORVU2Hr1G003540.3 | Barley | plasma membrane | 30.26 | 11.27 |
| HORVU3Hr1G010980.1 | Barley | cytosol | 31.65 | 9.64 |
| TraesCS7A01G006800.1 | Wheat | cytosol | 2.78 | 4.24 |
| HORVU7Hr1G000080.1 | Barley | cytosol | 1.39 | 2.59 |
| HORVU7Hr1G000050.1 | Barley | cytosol | 0.7 | 1.78 |
| HORVU7Hr1G000340.1 | Barley | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G000110.2 | EnsemblPlantsGene:HORVU7Hr1G000110 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF7 | PFAM:PF00931 |
| PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI000B47DAD2 | UniProt:A0A287VAU8 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr7H:-:131920..135943
Molecular Weight (calculated)
65485.7 Da
IEP (calculated)
4.959
GRAVY (calculated)
-0.275
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRELKEEVQ IKPLLEQQVE VPSPPKHEED EEEEAEEFPQ VDNIAFSDPG PSTRDVSIRG REIGAPISAL MGSMRPLVGK LDMLLQAPLL RRCSNSKRFK
101: RVEDGIGLLK DDVQKMGSYL DQLSEVEDPP LAANCWMNEA RNLSYDMEDY IDSLIFVGPE NPSLVPDNIK TTRSSLKFRL CLKFLGHAKT PKTQVVSIAE
201: TLSEFRMYVL EAIERHQRYN LHSYSTLKRR LVPVGPTLPI PTQYDEEASH IVIDGWMSKF INSLVENVGE DQQLKVVSIL GPSCLGKTTL ANVLYSRIGK
301: QYHCRAFVRV SKKPDMKRIF CDISSQLQLP DHPWDFKETD LIDSIKKYLQ NKRYLIIIDD LWETSVWDLI NQAFPKGSQG SRIVTTTQIE NVAIACCCYQ
401: SEHVFEMQPL DDDHSKKLFF NRLFGSESDC PDELKQVCDE ITEICDGLPL ATICIASLLL SQPLMSNDLF TYIHQSLISC FSAVPTSERT RQALNLSYNN
501: LPRYLKTCLL YLNMYPEGYT FLKDDLVKQW VAEGLIYAIE GQDIEKVLSL STYWKKLHPA DMCELQQGGV VLSSA
101: RVEDGIGLLK DDVQKMGSYL DQLSEVEDPP LAANCWMNEA RNLSYDMEDY IDSLIFVGPE NPSLVPDNIK TTRSSLKFRL CLKFLGHAKT PKTQVVSIAE
201: TLSEFRMYVL EAIERHQRYN LHSYSTLKRR LVPVGPTLPI PTQYDEEASH IVIDGWMSKF INSLVENVGE DQQLKVVSIL GPSCLGKTTL ANVLYSRIGK
301: QYHCRAFVRV SKKPDMKRIF CDISSQLQLP DHPWDFKETD LIDSIKKYLQ NKRYLIIIDD LWETSVWDLI NQAFPKGSQG SRIVTTTQIE NVAIACCCYQ
401: SEHVFEMQPL DDDHSKKLFF NRLFGSESDC PDELKQVCDE ITEICDGLPL ATICIASLLL SQPLMSNDLF TYIHQSLISC FSAVPTSERT RQALNLSYNN
501: LPRYLKTCLL YLNMYPEGYT FLKDDLVKQW VAEGLIYAIE GQDIEKVLSL STYWKKLHPA DMCELQQGGV VLSSA
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.