Factsheet for TraesCS7A01G006800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G489200.1	Wheat	extracellular	24.4	57.14
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	37.93	53.96
TraesCS7A01G006600.3	Wheat	cytosol	53.85	41.09
TraesCS4A01G489500.1	Wheat	cytosol	46.68	36.97
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	53.58	34.77
HORVU7Hr1G000690.5	Barley	cytosol	88.59	31.87
TraesCS7A01G031300.2	Wheat	cytosol	80.64	29.86
TraesCS4A01G457900.1	Wheat	cytosol	79.31	29.43
TraesCS4A01G467000.1	Wheat	cytosol	55.7	23.46
TraesCS5A01G344300.1	Wheat	cytosol	36.6	23.39
TraesCS7A01G007200.1	Wheat	cytosol	51.99	21.75
TraesCS7A01G004300.1	Wheat	cytosol	53.85	19.01
TraesCS5A01G481100.1	Wheat	cytosol	34.75	17.37
TraesCS7A01G005100.3	Wheat	cytosol	53.85	16.94
TraesCS7A01G032200.1	Wheat	cytosol	51.46	16.87
TraesCS4A01G464900.1	Wheat	nucleus	57.29	16.43
Os10t0370100-01	Rice	cytosol, plasma membrane, plastid	48.81	14.19
TraesCS4A01G488300.1	Wheat	cytosol	52.79	13.05
TraesCS7A01G004100.1	Wheat	cytosol	52.25	13.03
TraesCS4A01G491300.1	Wheat	plasma membrane	45.09	12.87
TraesCS7A01G524300.1	Wheat	plasma membrane	32.1	12.37
TraesCS4A01G486700.1	Wheat	cytosol	49.87	12.37
TraesCS5A01G325800.1	Wheat	cytosol	46.42	12.06
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	33.42	11.72
Os11t0462900-00	Rice	plasma membrane	45.36	10.78
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	25.73	9.9
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	34.75	9.86
TraesCS2A01G564800.1	Wheat	cytosol	33.42	9.69
TraesCS5A01G344100.1	Wheat	nucleus	37.67	9.58
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	35.54	6.93
TraesCS4A01G349800.1	Wheat	cytosol	35.81	6.65
TraesCS2A01G564200.1	Wheat	cytosol	32.63	6.49
TraesCS7A01G027800.1	Wheat	golgi	36.34	6.48
HORVU7Hr1G000110.2	Barley	nucleus	4.24	2.78
TraesCS4A01G487600.1	Wheat	nucleus	2.65	1.88
TraesCS4A01G489400.1	Wheat	cytosol	0.8	0.88
TraesCS4A01G489100.1	Wheat	cytosol	0.8	0.88
TraesCS7A01G006700.1	Wheat	mitochondrion	0.27	0.44
TraesCS4A01G493000.1	Wheat	cytosol	0.27	0.36
TraesCS7A01G008100.1	Wheat	cytosol	0.27	0.31
TraesCS3A01G009300.1	Wheat	cytosol	0.27	0.31
TraesCS2A01G004300.1	Wheat	cytosol	0.27	0.25
TraesCS5A01G344200.2	Wheat	peroxisome	0.0	0.0
TraesCS4A01G492400.1	Wheat	cytosol	0.0	0.0
TraesCS7A01G561200.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G006800.1	EnsemblPlantsGene:TraesCS7A01G006800	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR43889
PANTHER:PTHR43889:SF7	SEG:seg	SUPFAM:SSF52047	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7A:+:3269086..3270219

Molecular Weight (calculated)

42215.3 Da

IEP (calculated)

6.569

GRAVY (calculated)

0.105

Length

377 amino acids

Sequence
(BLAST)

001: MPCLTEFKLV RVLNLQLSGQ GCRGDDIADL SGISEMFQLR YLKIACDVCI KLPNHVLQYL ATLDITDARF APVPWDVNFP RLLHLHLSLP VERDLLDWVD
101: RIGTPSLMSL GTLNYLQELH LTISSLSTFH HVAKNMEALG SLLGGHGNLK TIAVAHASSV KNTAASKTNI LWACMEPPAL LQRFEFSPHI SCIFSQVPSW
201: VRKLGNLCIL KIAVRELMMN SVDILRGLPA LTALSLYVET PPDDNIIFDK AGFSVLKYFK FTFMRGIAWV KFEEDSTRNL WKLKLVFKAI PPMDHPQWRT
301: YGHGTALISI NYMPGLREIF TKFGGAAADL EYVSRIGVAS NHPSNPIIDV QFVDSGSYVD ESTETEITST HEILEEN

Best Arabidopsis Sequence Match ( AT4G13880.1 )
(BLAST)

001: MHSCSERRMM TVIWSLCLIF CLSNSILAIA KDLCLPDQRD ALLEFKNEFY VQEFDPHMKC EKATETWRNK TDCCSWNRVS CDPKTGKVVE LDLMSSCLNG
101: PLRSNSSLFR LQHLQSLELS SNNISGILPD SIGNLKYLRS LSFRTCHLFG KIPSSLGSLS YLTHLDLSYN DFTSEGPDSG GNLNRLTDLQ LVLLNLSSVT
201: WIDLGSNQLK GRGIVDFSIF LHLKSLCSLD LSYLNTRSMV DLSFFSHLMS LDELDLSGIN LKISSTLSFP SATGTLILAS CNIVEFPKFL ENQTSLFYLD
301: ISANHIEGQV PEWLWRLPTL SFVNIAQNSF SGELPMLPNS IYSFIASDNQ FSGEIPRTVC ELVSLNTLVL SNNKFSGSIP RCFENFKTIS ILHLRNNSLS
401: GVFPKEIISE TLTSLDVGHN WLSGQLPKSL IKCTDLEFLN VEDNRINDKF PFWLRSLSNL QILVLRSNEF YGPIFSLEDS LSFPKLRIFD ISENHFTGVL
501: PSDYFAGWSA MSSVVDIFDT TPQVHILGVF QGYYHNSVVL TNKGLNMELV GSGFTIYKTI DVSGNRLEGD IPESIGILKE LIVLNMSNNA FTGHIPPSLS
601: NLSNLQSLDL SQNRLSGSIP PELGKLTFLE WMNFSYNRLE GPIPQATQIQ SQNSSSFAEN PGLCGAPFLN KCGGEEEEEE EATKQEEDED EEKEEKNQVF
701: SWIAAAIGYV PGVFCGLTIA HILTS

Arabidopsis Description

AtRLP48
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.