Factsheet for TraesCS7A01G006700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G000020.2	Barley	cytosol	83.7	26.95
TraesCS7A01G007200.1	Wheat	cytosol	84.14	21.2
TraesCS2A01G004300.1	Wheat	cytosol	37.44	21.2
HORVU3Hr1G037800.3	Barley	nucleus, plastid	81.06	18.51
TraesCS4A01G467000.1	Wheat	cytosol	65.2	16.54
HORVU7Hr1G000040.14	Barley	cytosol	83.7	15.93
TraesCS7A01G004300.1	Wheat	cytosol	69.16	14.7
TraesCS4A01G457900.1	Wheat	cytosol	61.67	13.78
TraesCS7A01G004100.1	Wheat	cytosol	91.19	13.69
TraesCS7A01G031300.2	Wheat	cytosol	61.23	13.65
TraesCS7D01G007900.1	Wheat	cytosol	91.63	13.58
TraesCS4A01G488300.1	Wheat	cytosol	90.31	13.44
TraesCS7D01G004600.1	Wheat	cytosol	89.43	13.3
TraesCS7D01G007300.2	Wheat	cytosol, plastid	89.87	13.25
TraesCS4A01G486700.1	Wheat	cytosol	86.78	12.96
HORVU7Hr1G000320.2	Barley	cytosol	85.46	12.77
TraesCS5A01G344200.2	Wheat	peroxisome	22.03	12.59
TraesCS5A01G481100.1	Wheat	cytosol	41.41	12.47
TraesCS7A01G008100.1	Wheat	cytosol	17.18	12.11
TraesCS7A01G032200.1	Wheat	cytosol	60.35	11.91
TraesCS7A01G005100.3	Wheat	cytosol	62.56	11.85
TraesCS7A01G561200.1	Wheat	cytosol	18.06	11.71
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	29.52	11.53
TraesCS4A01G464900.1	Wheat	nucleus	63.44	10.95
TraesCS4A01G491300.1	Wheat	plasma membrane	62.11	10.67
TraesCS7A01G524300.1	Wheat	plasma membrane	44.49	10.33
TraesCS4A01G489100.1	Wheat	cytosol	15.42	10.29
TraesCS4A01G489400.1	Wheat	cytosol	15.42	10.29
Os10t0370100-01	Rice	cytosol, plasma membrane, plastid	56.39	9.87
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	41.41	9.59
TraesCS5A01G325800.1	Wheat	cytosol	57.71	9.03
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	42.73	9.02
Os11t0462900-00	Rice	plasma membrane	55.51	7.94
TraesCS2A01G564800.1	Wheat	cytosol	44.05	7.69
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	44.93	7.67
TraesCS4A01G487600.1	Wheat	nucleus	17.18	7.33
TraesCS5A01G344100.1	Wheat	nucleus	42.73	6.55
TraesCS4A01G493000.1	Wheat	cytosol	7.93	6.45
TraesCS5A01G344300.1	Wheat	cytosol	14.54	5.59
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	47.14	5.54
TraesCS2A01G564200.1	Wheat	cytosol	44.05	5.28
TraesCS7A01G027800.1	Wheat	golgi	46.7	5.01
TraesCS4A01G349800.1	Wheat	cytosol	44.05	4.93
TraesCS4A01G489500.1	Wheat	cytosol	8.37	3.99
TraesCS3A01G009300.1	Wheat	cytosol	4.85	3.38
TraesCS7A01G006800.1	Wheat	cytosol	0.44	0.27
TraesCS7A01G006600.3	Wheat	cytosol	0.0	0.0
TraesCS4A01G492400.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G489200.1	Wheat	extracellular	0.0	0.0
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7A01G006700.1	EnsemblPlantsGene:TraesCS7A01G006700	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR43889	PANTHER:PTHR43889:SF7	PFAM:PF00931
PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7A:-:3207420..3208446

Molecular Weight (calculated)

25519.6 Da

IEP (calculated)

4.785

GRAVY (calculated)

-0.148

Length

227 amino acids

Sequence
(BLAST)

001: MKRLFRDMLS QFQRKQPQAS QDASDELRIT AENINNCLHG KRYLVVVDDL WDTSAWDVIN QLLPKCSQGS RIITTTQIED VALACCCDDP EQVFEMKPLD
101: DDHSRKLFFG RIFGTESDCP EEFKQVSGQI VEICGGLPLA TISIASLLAN QPSVSVDLLT HIQDSLVSCL SSNSTSERTR QVLNLSYNSL PHYLKTCLLQ
201: LGMYPEGSII FKRDLVLQWV AEGFLGK

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.