Factsheet for TraesCS4A01G489400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G489100.1	Wheat	cytosol	98.53	98.53
TraesCS4A01G493000.1	Wheat	cytosol	69.71	84.95
TraesCS7A01G008100.1	Wheat	cytosol	76.76	81.06
TraesCS4A01G492400.1	Wheat	cytosol	70.88	54.9
TraesCS4A01G487600.1	Wheat	nucleus	82.35	52.63
HORVU7Hr1G000020.2	Barley	cytosol	67.06	32.34
TraesCS7A01G561200.1	Wheat	cytosol	27.35	26.57
TraesCS3A01G009300.1	Wheat	cytosol	24.71	25.85
HORVU3Hr1G037800.3	Barley	nucleus, plastid	71.18	24.35
TraesCS5A01G344200.2	Wheat	peroxisome	26.47	22.67
TraesCS7A01G007200.1	Wheat	cytosol	52.65	19.87
TraesCS7D01G007900.1	Wheat	cytosol	89.12	19.78
TraesCS7A01G004100.1	Wheat	cytosol	87.06	19.58
TraesCS7D01G004600.1	Wheat	cytosol	87.06	19.4
TraesCS4A01G488300.1	Wheat	cytosol	86.47	19.28
TraesCS7D01G007300.2	Wheat	cytosol, plastid	86.76	19.16
TraesCS4A01G486700.1	Wheat	cytosol	82.65	18.49
TraesCS2A01G004300.1	Wheat	cytosol	20.88	17.71
HORVU7Hr1G000320.2	Barley	cytosol	73.82	16.52
TraesCS7A01G006700.1	Wheat	mitochondrion	10.29	15.42
TraesCS4A01G457900.1	Wheat	cytosol	41.18	13.78
TraesCS7A01G031300.2	Wheat	cytosol	40.0	13.36
TraesCS7A01G032200.1	Wheat	cytosol	40.29	11.91
TraesCS4A01G464900.1	Wheat	nucleus	45.0	11.63
TraesCS7A01G005100.3	Wheat	cytosol	40.29	11.44
Os10t0370100-01	Rice	cytosol, plasma membrane, plastid	38.24	10.02
TraesCS5A01G325800.1	Wheat	cytosol	42.65	9.99
HORVU7Hr1G000040.14	Barley	cytosol	35.0	9.97
TraesCS4A01G491300.1	Wheat	plasma membrane	35.29	9.08
Os11t0462900-00	Rice	plasma membrane	40.29	8.64
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	23.53	8.16
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	28.53	7.3
TraesCS7A01G524300.1	Wheat	plasma membrane	20.59	7.16
TraesCS4A01G467000.1	Wheat	cytosol	18.82	7.15
TraesCS5A01G344100.1	Wheat	nucleus	28.24	6.48
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	18.24	5.77
TraesCS2A01G564800.1	Wheat	cytosol	20.88	5.46
TraesCS4A01G349800.1	Wheat	cytosol	29.12	4.88
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	25.88	4.55
TraesCS7A01G027800.1	Wheat	golgi	25.29	4.07
TraesCS2A01G564200.1	Wheat	cytosol	18.53	3.33
TraesCS7A01G004300.1	Wheat	cytosol	3.24	1.03
TraesCS7A01G006800.1	Wheat	cytosol	0.88	0.8
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	0.59	0.75
TraesCS4A01G489200.1	Wheat	extracellular	0.29	0.62
TraesCS7A01G006600.3	Wheat	cytosol	0.59	0.4
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	0.59	0.34
TraesCS4A01G489500.1	Wheat	cytosol	0.29	0.21
TraesCS5A01G481100.1	Wheat	cytosol	0.0	0.0
TraesCS5A01G344300.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G489400.1	EnsemblPlantsGene:TraesCS4A01G489400	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR43889	PANTHER:PTHR43889:SF7	PFAM:PF00931
SEG:seg	SUPFAM:SSF52540	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4A:+:740346720..740348363

Molecular Weight (calculated)

38905.4 Da

IEP (calculated)

8.924

GRAVY (calculated)

-0.374

Length

340 amino acids

Sequence
(BLAST)

001: MLDHGIVEEE EERVVYFYPT QDVSVGGRGR DMDASFSVSL GAMRPLLKKL DMMLGPHGCK LTKGVNDRSQ LLKDDLEEIA TYLEDLLEVE DPPLAAKCWM
101: KEAHELSYDI LDCIDNFVPP DQSFGYKFDH NMTHVKIPKR LKWQKQIEYA APDALGHVIS KNTRVDVIRA PRKLKWYQQM VEKVSEFRIY AREAIRRYER
201: YQVHCCSTLA ARRLSAIGPI VPMPPLPCEK TCFGLVIDGR MSKFINSMAN DADQQLKVVS IHGSGCLGKT MVARVLYNKI GRQFHCRAFI RVSKKPNMKR
301: LFCDILSQIQ RKQPQASQAA SDELRITAEN IRNYLHGKGI

Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)

001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN

Arabidopsis Description

RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.