Factsheet for TraesCS4A01G487600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G493000.1	Wheat	cytosol	43.23	82.44
TraesCS4A01G489400.1	Wheat	cytosol	52.63	82.35
TraesCS4A01G489100.1	Wheat	cytosol	51.69	80.88
TraesCS4A01G492400.1	Wheat	cytosol	66.54	80.64
TraesCS7A01G008100.1	Wheat	cytosol	47.74	78.88
HORVU3Hr1G037800.3	Barley	nucleus, plastid	67.67	36.22
HORVU7Hr1G000020.2	Barley	cytosol	42.86	32.34
TraesCS7A01G004100.1	Wheat	cytosol	82.14	28.9
TraesCS4A01G488300.1	Wheat	cytosol	79.7	27.8
TraesCS4A01G486700.1	Wheat	cytosol	79.32	27.76
TraesCS3A01G009300.1	Wheat	cytosol	16.73	27.38
TraesCS7A01G561200.1	Wheat	cytosol	17.67	26.86
HORVU7Hr1G000320.2	Barley	cytosol	72.56	25.41
TraesCS5A01G344200.2	Wheat	peroxisome	18.05	24.18
TraesCS7A01G007200.1	Wheat	cytosol	39.66	23.42
TraesCS2A01G004300.1	Wheat	cytosol	15.04	19.95
TraesCS7A01G006700.1	Wheat	mitochondrion	7.33	17.18
TraesCS7A01G031300.2	Wheat	cytosol	30.83	16.11
TraesCS4A01G457900.1	Wheat	cytosol	30.64	16.04
TraesCS7A01G032200.1	Wheat	cytosol	30.45	14.09
TraesCS7A01G005100.3	Wheat	cytosol	31.02	13.77
TraesCS4A01G464900.1	Wheat	nucleus	31.39	12.7
TraesCS5A01G325800.1	Wheat	cytosol	32.89	12.06
HORVU7Hr1G000040.14	Barley	cytosol	25.75	11.48
Os10t0370100-01	Rice	cytosol, plasma membrane, plastid	27.07	11.1
TraesCS4A01G491300.1	Wheat	plasma membrane	25.0	10.07
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	17.11	9.29
Os11t0462900-00	Rice	plasma membrane	27.26	9.14
TraesCS7A01G524300.1	Wheat	plasma membrane	15.79	8.59
TraesCS4A01G467000.1	Wheat	cytosol	14.29	8.49
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	20.68	8.28
TraesCS5A01G344100.1	Wheat	nucleus	22.18	7.96
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	12.97	6.42
TraesCS2A01G564800.1	Wheat	cytosol	14.85	6.08
TraesCS4A01G349800.1	Wheat	cytosol	22.74	5.96
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	18.23	5.02
TraesCS4A01G489200.1	Wheat	extracellular	1.5	4.97
TraesCS7A01G027800.1	Wheat	golgi	18.61	4.68
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	2.26	4.53
TraesCS2A01G564200.1	Wheat	cytosol	15.23	4.28
TraesCS7A01G004300.1	Wheat	cytosol	6.2	3.09
TraesCS7A01G006600.3	Wheat	cytosol	2.63	2.83
TraesCS7A01G006800.1	Wheat	cytosol	1.88	2.65
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	2.63	2.41
TraesCS4A01G489500.1	Wheat	cytosol	1.32	1.47
TraesCS5A01G344300.1	Wheat	cytosol	1.5	1.36
TraesCS5A01G481100.1	Wheat	cytosol	1.69	1.19

Protein Annotations

Gene3D:3.40.30.10	Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0043531	GO:GO:0045454	InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PFscan:PS51354	PANTHER:PTHR43889	PANTHER:PTHR43889:SF7	SUPFAM:SSF52540	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS4A01G487600	EnsemblPlants:TraesCS4A01G487600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:739860752..739867409

Molecular Weight (calculated)

60881.1 Da

IEP (calculated)

9.907

GRAVY (calculated)

-0.449

Length

532 amino acids

Sequence
(BLAST)

001: MYDHGGSSSS GPRAKEEMQP EVVLYTASAS RRRGRTSTNL YALRALLRGY GLTMYERDVS RSKAHRCELK SLLAARGCAF SLPQLLVGGR LVGCPDDVRK
101: LHRAGGLRPL LDGAPRPYAA FVCQACKRVG SEPCPQCSES RNNKMLDHGI IADEQDTVVL FYPTQDVSIG GRGREMNAST SVSLGAMRPL LKKLDMMLGP
201: HGCKLTKWVN DRSQLLRDDL EEIGSYLEDM LEVEDPPLAA QCWKKEAREL SYDIQDCIDN FVPPESLGYK SDHKMTRVKI PKRLKWQKQI EYAAPDVSGH
301: FISKTICVDV IRAPRKHKWY QQIVEKVSEF RIYAREAIRR YERYQLHCCS TSAARRFSAI GPIMPMSPLP CEKTCSGLVI DGRMRKFIKS LSNDTDQQLK
401: VVSVHGSRCL GKTMLAKVLY NKIGRIFHCR AFVRVSKKPD MKRLFRDMLS QFQRKQPQGS QDASDELRVT AENIRNYLHG KRHLYANHMY NTYIAYYVLI
501: FHMVQNHMYY IKSLQVALLF LRKKRHDDIV NL

Best Arabidopsis Sequence Match ( AT5G13810.1 )
(BLAST)

001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS

Arabidopsis Description

AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.