Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G487700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 79.5 | 48.3 |
| TraesCS4A01G489500.1 | Wheat | cytosol | 85.71 | 28.99 |
| TraesCS7A01G006600.3 | Wheat | cytosol | 77.02 | 25.1 |
| TraesCS7A01G006800.1 | Wheat | cytosol | 57.14 | 24.4 |
| TraesCS7A01G007600.1 | Wheat | endoplasmic reticulum, golgi | 50.93 | 14.11 |
| TraesCS7A01G004300.1 | Wheat | cytosol | 81.99 | 12.36 |
| TraesCS7A01G007200.1 | Wheat | cytosol | 67.7 | 12.1 |
| HORVU7Hr1G000040.14 | Barley | cytosol | 76.4 | 10.31 |
| TraesCS5A01G344300.1 | Wheat | cytosol | 37.27 | 10.17 |
| TraesCS4A01G457900.1 | Wheat | cytosol | 58.39 | 9.25 |
| TraesCS7A01G031300.2 | Wheat | cytosol | 55.9 | 8.84 |
| TraesCS4A01G467000.1 | Wheat | cytosol | 49.07 | 8.83 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 81.37 | 8.55 |
| TraesCS5A01G481100.1 | Wheat | cytosol | 39.75 | 8.49 |
| TraesCS7A01G004100.1 | Wheat | cytosol | 79.5 | 8.47 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 79.5 | 8.39 |
| HORVU7Hr1G000320.2 | Barley | cytosol | 78.88 | 8.36 |
| TraesCS4A01G488300.1 | Wheat | cytosol | 77.02 | 8.13 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 77.64 | 8.12 |
| TraesCS4A01G486700.1 | Wheat | cytosol | 75.16 | 7.96 |
| TraesCS7A01G005100.3 | Wheat | cytosol | 54.04 | 7.26 |
| TraesCS7A01G032200.1 | Wheat | cytosol | 47.83 | 6.7 |
| TraesCS4A01G464900.1 | Wheat | nucleus | 54.04 | 6.62 |
| TraesCS4A01G491300.1 | Wheat | plasma membrane | 49.69 | 6.06 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 44.1 | 5.47 |
| TraesCS2A01G023400.1 | Wheat | cytosol, endoplasmic reticulum, plastid, vacuole | 28.57 | 4.69 |
| TraesCS7A01G464600.1 | Wheat | cytosol, nucleus, plasma membrane | 29.81 | 4.47 |
| Os11t0462900-00 | Rice | plasma membrane | 43.48 | 4.41 |
| TraesCS7A01G524300.1 | Wheat | plasma membrane | 26.09 | 4.29 |
| TraesCS5A01G325800.1 | Wheat | cytosol | 37.89 | 4.2 |
| TraesCS5A01G344100.1 | Wheat | nucleus | 38.51 | 4.18 |
| TraesCS2A01G564800.1 | Wheat | cytosol | 28.57 | 3.54 |
| TraesCS4A01G223400.2 | Wheat | cytosol, mitochondrion, plasma membrane, plastid | 26.09 | 3.16 |
| TraesCS4A01G461800.1 | Wheat | endoplasmic reticulum, golgi | 32.92 | 2.74 |
| TraesCS2A01G564200.1 | Wheat | cytosol | 31.68 | 2.69 |
| TraesCS7A01G027800.1 | Wheat | golgi | 32.92 | 2.51 |
| TraesCS4A01G349800.1 | Wheat | cytosol | 26.71 | 2.12 |
| TraesCS4A01G487600.1 | Wheat | nucleus | 4.97 | 1.5 |
| HORVU3Hr1G037800.3 | Barley | nucleus, plastid | 6.83 | 1.11 |
| TraesCS4A01G489400.1 | Wheat | cytosol | 0.62 | 0.29 |
| TraesCS4A01G489100.1 | Wheat | cytosol | 0.62 | 0.29 |
| TraesCS7A01G561200.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS4A01G492400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7A01G008100.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7A01G006700.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| TraesCS5A01G344200.2 | Wheat | peroxisome | 0.0 | 0.0 |
| TraesCS4A01G493000.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3A01G009300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2A01G004300.1 | Wheat | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G000020.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G489200.1 | EnsemblPlantsGene:TraesCS4A01G489200 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4A:+:740306604..740307089
Molecular Weight (calculated)
18067.2 Da
IEP (calculated)
9.204
GRAVY (calculated)
0.135
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQLGNLCIL KIAVDGLSVN DVRILRGLRC LTALSLCVEK SPDIKIIFGT AAGFTTLKYL KLRFLSEIAW LRFEMDAMPN LRKLRLVFDA IPQMDQRLEL
101: FSESEQWKQY RHGTALISIE HITGLTEVSA KFVGAAADLE YVSRIGVVSN HPGNSYSLHA K
101: FSESEQWKQY RHGTALISIE HITGLTEVSA KFVGAAADLE YVSRIGVVSN HPGNSYSLHA K
001: MDTRKVKSSS RDAVNCLPDE ILAKILSYLP TKRAVSTSLI SKRWRNLFAL MIQLFESQHH LYLDDSDLVY PEEGKGEMKD VQESFGDFVD KTLTDCNTIK
101: KLSILCPLKC CAHKDIDQWL HHAMERGVVD LDMRFKMGFT PTQNEWPCNV FTIKTLVKLT FRIEVGQNKM PYCPKGVLPV LKSLFLHAIW FACERLCHSM
201: LPGCPILEEL FLHDLRGYRY NDSPNFSISH KTLKRLTVHF NNSFELGRPM QFDTPSLLYL EYSGFAPCRY SRTSYLNSLV EVKLDVHIRH ECNTHMHLSP
301: IIDWIGNVKT LSLSPASVKM MYSRCVELHV FSNLVKLYFE SNEKEGWEVL PRLLNKSPKL ETLVLKGLHC ASDHGVCVDR NEVKVLEIYG FSGCGREVRQ
401: VKCLLREMQF LQVMKVEIDA HDDNKKLRVI NHLLDLPKRP SKFHIQFL
101: KLSILCPLKC CAHKDIDQWL HHAMERGVVD LDMRFKMGFT PTQNEWPCNV FTIKTLVKLT FRIEVGQNKM PYCPKGVLPV LKSLFLHAIW FACERLCHSM
201: LPGCPILEEL FLHDLRGYRY NDSPNFSISH KTLKRLTVHF NNSFELGRPM QFDTPSLLYL EYSGFAPCRY SRTSYLNSLV EVKLDVHIRH ECNTHMHLSP
301: IIDWIGNVKT LSLSPASVKM MYSRCVELHV FSNLVKLYFE SNEKEGWEVL PRLLNKSPKL ETLVLKGLHC ASDHGVCVDR NEVKVLEIYG FSGCGREVRQ
401: VKCLLREMQF LQVMKVEIDA HDDNKKLRVI NHLLDLPKRP SKFHIQFL
Arabidopsis Description
Putative F-box/LRR-repeat protein At5g25860 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7J7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.