Factsheet for TraesCS4A01G486700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G493000.1	Wheat	cytosol	16.91	92.11
TraesCS4A01G492400.1	Wheat	cytosol	26.25	90.89
TraesCS7A01G006700.1	Wheat	mitochondrion	12.96	86.78
TraesCS7A01G008100.1	Wheat	cytosol	17.83	84.16
TraesCS4A01G488300.1	Wheat	cytosol	84.14	83.87
TraesCS4A01G489400.1	Wheat	cytosol	18.49	82.65
TraesCS7D01G004600.1	Wheat	cytosol	82.83	82.5
TraesCS4A01G489100.1	Wheat	cytosol	18.42	82.35
TraesCS7D01G007900.1	Wheat	cytosol	82.89	82.25
TraesCS7A01G006600.3	Wheat	cytosol	26.51	81.58
TraesCS7D01G007300.2	Wheat	cytosol, plastid	82.5	81.43
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	14.01	80.38
TraesCS7A01G004100.1	Wheat	cytosol	79.21	79.63
TraesCS4A01G487600.1	Wheat	nucleus	27.76	79.32
HORVU7Hr1G000020.2	Barley	cytosol	36.45	78.58
HORVU7Hr1G000320.2	Barley	cytosol	78.36	78.41
TraesCS7A01G007200.1	Wheat	cytosol	46.45	78.36
HORVU3Hr1G037800.3	Barley	nucleus, plastid	51.05	78.07
HORVU7Hr1G000040.14	Barley	cytosol	60.26	76.78
TraesCS7A01G004300.1	Wheat	cytosol	53.03	75.47
TraesCS4A01G489200.1	Wheat	extracellular	7.96	75.16
TraesCS4A01G489500.1	Wheat	cytosol	22.89	73.11
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	20.39	53.36
TraesCS4A01G457900.1	Wheat	cytosol	34.93	52.26
TraesCS7A01G031300.2	Wheat	cytosol	34.61	51.67
TraesCS4A01G467000.1	Wheat	cytosol	29.8	50.61
TraesCS7A01G006800.1	Wheat	cytosol	12.37	49.87
TraesCS7A01G005100.3	Wheat	cytosol	37.96	48.16
TraesCS7A01G032200.1	Wheat	cytosol	34.61	45.74
TraesCS4A01G464900.1	Wheat	nucleus	38.16	44.11
TraesCS4A01G491300.1	Wheat	plasma membrane	33.03	38.0
TraesCS7A01G561200.1	Wheat	cytosol	8.62	37.43
Os10t0370100-01	Rice	cytosol, plasma membrane, plastid	31.71	37.16
TraesCS2A01G004300.1	Wheat	cytosol	9.74	36.91
TraesCS5A01G325800.1	Wheat	cytosol	35.2	36.87
TraesCS5A01G481100.1	Wheat	cytosol	17.96	36.21
TraesCS5A01G344300.1	Wheat	cytosol	13.68	35.25
TraesCS5A01G344200.2	Wheat	peroxisome	8.75	33.5
TraesCS7A01G524300.1	Wheat	plasma membrane	20.72	32.21
Os11t0462900-00	Rice	plasma membrane	33.42	32.03
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	21.25	30.05
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	19.14	29.69
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	24.08	27.54
TraesCS3A01G009300.1	Wheat	cytosol	5.79	27.08
TraesCS2A01G564800.1	Wheat	cytosol	21.84	25.54
TraesCS5A01G344100.1	Wheat	nucleus	24.34	24.97
TraesCS4A01G349800.1	Wheat	cytosol	25.53	19.12
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	24.21	19.04
TraesCS2A01G564200.1	Wheat	cytosol	23.03	18.48
TraesCS7A01G027800.1	Wheat	golgi	24.21	17.4

Protein Annotations

Gene3D:2.120.10.80	Gene3D:3.40.30.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0043531
GO:GO:0045454	InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:IPR013087	InterPro:IPR015915	InterPro:IPR032675
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PFAM:PF01344	PRINTS:PR00364	ScanProsite:PS00028	PFscan:PS51354	PANTHER:PTHR43889	PANTHER:PTHR43889:SF7
InterPro:RX-like_CC	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF52058	SUPFAM:SSF52540	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS4A01G486700	EnsemblPlants:TraesCS4A01G486700.1	InterPro:Znf_C2H2_type	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr4A:+:739642850..739655404

Molecular Weight (calculated)

171190.0 Da

IEP (calculated)

7.331

GRAVY (calculated)

-0.211

Length

1520 amino acids

Sequence
(BLAST)

0001: MYDPGGSSSS RPRGKEELQP EVVLYTATAS ASRRRGRTSA DRYALCALLR GYGLAVDVRD VSRSKAHRCE LKSLLAARGC AFSLPQLLVG GRLVGGPDDV
0101: RQLHQDGGLR PLLDGAPRPY AVFVCQACKR VGSEPCEDCS DSRNKMLDHV ILEKEDEQER VVLFYPTQDV SMGGRGREVD TSFSVSLGAM RPLLKKLDMM
0201: LGPHGCKLTK GVNDRLQLLQ DDLEEIAAYL EDLLEVEDPP LAAKCWMKEA HELSYDILDC IDNFVPPNQS LGYKSDHKMT HVKIPKRLKW KKQIEYAALD
0301: VSGHVIYKTI RVDVICAPRR LKWYQQIIEK VSEFRIYAQE VVQRYDRYQV HYCSTSVASR FSGIGPMMPM PPPPCEKTCS SLVIDGRMSK FINSQLANDE
0401: NQQLGVVSIH GYGCLGKTML AKVLYNKLGR QFHCRAFIRV SKKPDMKRLF RDMLSQIQRK HPQASEDASD ELHITAENIR NYLHAKRYLI VVDDLWDTAA
0501: WDVINQLFPK CSQGSRIITT TQIEDVALAC CSVDPEQVFK MNPLDDDHSR KLFFDRLFGS ESNCPEELKQ VSSQIIEICG GLPLATVSIA SLLANQPSVS
0601: VDLLTHIHDS LVSCLSSNST SERTRQVLHL SYNSLPHYLK TCLLQLRMYP EGSLIFKHDL VRQWVGEGII ATREGQDTEE VAGMYFDELV DRRFIQPMSI
0701: NFNNEVMSCT VHDVVHDLIA HKSAEENFIV VLDHNRKILA LSHKVHRLSL QLGDAKYAKI PANIRKSQVR SLGVFGLSEC MPCIGEFKLV RVLNIHLSGH
0801: HNGDQELAVD LTRISGLFHL IYLKIVCDVC IRLPNRMRGL QCLETLDVMD TPSGTYVPWD IIYLTRLLHL SLPPHTNLLD WSFGDDLSLC RPNHLQDLCI
0901: STPPSSDYDH LKRRMYAPDY LMYGHDSLKT VKLVAHGSSV SYGDTSKARV RWVLDKLTHH VQRIEVSPHI PVIFCKMHLW DIQHGNLCIL KIAVDGLSVN
1001: DVDILSGLPA LTAMSLYVQK SPNIKIIFCM GAGFTALKYL KLRFMSGIAW LKFEADAMPN LWKLRLVFDA IPQMDQRLDL YSEGDQWTQY RHGNALINIE
1101: HMARLREVSA KFEGAAADLK YVSRIGIVSN HPSNAIINVQ LVDSGSHGDK RISSTSPEST SCPLHVPGAG AGGEVSWSNI IGAIGRDLFI YCLHRLSRWD
1201: YGAIASLNHD FNSVVRNGDI YRLRRKNGVA EHWLYLPCRN LHEWEAYDPS TGRWIHVPKI PPAESSYWDS LAVGTELLVF GDFGRVAWRY SILTNSWTWL
1301: ADEMNTPRYC FGSASVGEKA YVAGGADSSN SHLSSVEMYD SETHTWTLLP SMNTARFGCS GAFMDGKFYV IGGITSSLEV LTCGEEYDLN WRSWRVIDNI
1401: AQGLNNTVLG APPLIAVVKN ELYGADYSEN NELKQYDKLD NKWITLGKLP VESKRKGCDM GFRACGDRLI VIGPPNNSTS KELVELHSWT PDKQQPVWNL
1501: VATRQFTNKG PFLYCTVMCC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.