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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G022400.1 Wheat nucleus 94.83 94.83
TraesCS4A01G467000.1 Wheat cytosol 46.46 68.27
TraesCS7A01G006700.1 Wheat mitochondrion 10.95 63.44
TraesCS7A01G007600.1 Wheat endoplasmic reticulum, golgi 27.38 61.96
TraesCS4A01G489500.1 Wheat cytosol 21.06 58.19
TraesCS7A01G006800.1 Wheat cytosol 16.43 57.29
TraesCS7A01G007200.1 Wheat cytosol 38.56 56.27
TraesCS7A01G031300.2 Wheat cytosol 43.35 55.99
TraesCS4A01G457900.1 Wheat cytosol 42.89 55.51
TraesCS7A01G006600.3 Wheat cytosol 20.84 55.47
TraesCS4A01G489200.1 Wheat extracellular 6.62 54.04
TraesCS4A01G487700.1 Wheat cytoskeleton, cytosol, peroxisome 10.11 50.19
TraesCS4A01G493000.1 Wheat cytosol 10.65 50.18
TraesCS7A01G032200.1 Wheat cytosol 43.88 50.17
TraesCS7A01G005100.3 Wheat cytosol 45.25 49.67
TraesCS7A01G008100.1 Wheat cytosol 11.71 47.83
TraesCS4A01G489400.1 Wheat cytosol 11.63 45.0
TraesCS4A01G489100.1 Wheat cytosol 11.41 44.12
TraesCS4A01G491300.1 Wheat plasma membrane 41.98 41.79
TraesCS5A01G344300.1 Wheat cytosol 18.56 41.36
TraesCS7A01G004300.1 Wheat cytosol 33.0 40.64
Os10t0370100-01 Rice cytosol, plasma membrane, plastid 39.24 39.78
TraesCS7A01G004100.1 Wheat cytosol 45.32 39.42
TraesCS5A01G481100.1 Wheat cytosol 22.59 39.39
TraesCS4A01G488300.1 Wheat cytosol 45.25 39.02
TraesCS5A01G325800.1 Wheat cytosol 42.66 38.66
TraesCS4A01G486700.1 Wheat cytosol 44.11 38.16
TraesCS2A01G004300.1 Wheat cytosol 11.56 37.91
TraesCS7A01G561200.1 Wheat cytosol 9.43 35.43
TraesCS5A01G344200.2 Wheat peroxisome 10.19 33.75
TraesCS7A01G524300.1 Wheat plasma membrane 24.18 32.52
Os11t0462900-00 Rice plasma membrane 38.63 32.03
TraesCS7A01G464600.1 Wheat cytosol, nucleus, plasma membrane 25.93 31.72
TraesCS4A01G487600.1 Wheat nucleus 12.7 31.39
TraesCS2A01G023400.1 Wheat cytosol, endoplasmic reticulum, plastid, vacuole 23.35 31.33
TraesCS4A01G492400.1 Wheat cytosol 10.04 30.07
TraesCS4A01G223400.2 Wheat cytosol, mitochondrion, plasma membrane, plastid 29.43 29.12
TraesCS5A01G344100.1 Wheat nucleus 30.95 27.46
TraesCS2A01G564800.1 Wheat cytosol 26.46 26.77
TraesCS3A01G009300.1 Wheat cytosol 6.16 24.92
TraesCS4A01G461800.1 Wheat endoplasmic reticulum, golgi 28.82 19.61
TraesCS4A01G349800.1 Wheat cytosol 29.81 19.32
TraesCS7A01G027800.1 Wheat golgi 29.51 18.35
TraesCS2A01G564200.1 Wheat cytosol 24.87 17.27
Protein Annotations
MapMan:15.5.5.3Gene3D:2.40.330.10Gene3D:3.40.50.300Gene3D:3.80.10.10InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0043531
InterPro:IPR003340InterPro:IPR015300InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPase
PFAM:PF00931PFAM:PF02362PRINTS:PR00364PFscan:PS50863PANTHER:PTHR43889PANTHER:PTHR43889:SF7
SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF52058SUPFAM:SSF52540EnsemblPlantsGene:TraesCS4A01G464900EnsemblPlants:TraesCS4A01G464900.1
TIGR:cd10017SEG:seg::::
Description
No Description!
Coordinates
chr4A:+:728506544..728511007
Molecular Weight (calculated)
149106.0 Da
IEP (calculated)
7.812
GRAVY (calculated)
-0.221
Length
1315 amino acids
Sequence
(BLAST)
0001: MRIGIDLTDE DEDEEPDLSK QKSLMHSAFI YDPTTATFSD PVARQRVGNS TVLEESCLLT SSDISMLSDG SVSASLGAMR PLVEKLDMLL ASAQEYSSLP
0101: KRIKDGMQLL KHDVEVLSFY LDELAEVEDP PPMAKCWMNE AHDLSYDMED YIDILLFVPP DHFIKKKKKR RRKKKMMIKK RLKWYKQIVC RAQVSEHGIK
0201: TSKIIHVNVP RLPSKPKIAK TISEFRSYVQ EAIERYDRYS LQCCSTLRRR FLSTSIMLPM PYEEAAHIVI DGRMNEFINS LAANDAADQQ QLKVVSVVGS
0301: GCLGKTTLAN VLYDRIRMQF ECRAFIQVSK NPDMKRLFRD LFLQLHKKKQ PRPANCNDFD ISDINISKHL QDKRYLIVID DLWDASVWDI IKYAFPKGNC
0401: GSRIIITTQI DDVALTCCCD HSEHVFEMKP LDGDYSRKLF FDKFSGSESD CPEEFKQVLK EIVDICGGLP LATINIASHL ANQDTEVSMD FLAYTRDTLR
0501: SYLWSNSTLE RTKQVLNLSY NNLPHYLKTC LLYLHIYPEA SIIWKDDLVK QWVAEGFIAT RKGRKQDQEM IEKAAGLYFD ALIERRFIQP SYINYNNKVL
0601: SCTVHEVVRD LIAHKSAEEN FIVVVDCNRK NIALSHKVRR LSLVFGDAKY AKIPANITKS QVRSLRFSGL FECMPCIREF KVLRLLDLQL FGYCGDPDPI
0701: DLTGISELFQ LRYLKIASDV CIRPPNRMQG LKCLETLDIL NATRVTAIPW DIMHLPHLLH LILPVDTNLL DWIGSTSDSV IHEWSLGKLN YLQDLHLTFF
0801: PTLPFYNHLE ASMEVLGSLI GGHGNLKTIV VAHGSSVKNI VDHSIGYRAS KAIIPLFCMA PPPLLQRFEF SLHNCCIFSQ IPPWVEKHGN LCILKIPVRE
0901: LMMICVDILG GLHALTTLSL YVETAPIHKI IFNKAAGFSV LKYFKLRCTT GIPWLKFEAD AMPNLLKLKL VFNAIPPMDQ PLFFTSGQLR HKVRHEHGTA
1001: VISIEHMPGL KEISAQFKGA VSDLEYASRT FISNHPSNPT INMQLVGCSS NVDGSRKRKQ QPDSTLKDEY AKRLDIPADK RIATSLEFSS SLDDLPMSVS
1101: QFFDYPAFSI CQPVESSSRL DDAEITPSGS DEGREHMFDK VVNPSDVGKL NRLVVPKHFA EKYFPLDAAA NDKGMLLSFE DRGGKLWRFR YSYWNSSQSY
1201: VMTKGWSRFV KEKKLNAGDT VSFCRGATEA TRDRLFIDWK CRAVVHDSLP KVDRPSRAVQ KRVRQFGVNL DTQQPQGGEL THDANAGAAG VESSAAASSP
1301: SSSQTEAHSS LDLGL
Best Arabidopsis Sequence Match ( AT1G01030.1 )
(BLAST)
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.