Factsheet for TraesCS3A01G009300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G561200.1	Wheat	cytosol	57.23	53.14
TraesCS6B01G013200.1	Wheat	cytosol	61.23	40.61
TraesCS2A01G004300.1	Wheat	cytosol	34.46	27.93
TraesCS7A01G008100.1	Wheat	cytosol	26.77	27.02
TraesCS4A01G493000.1	Wheat	cytosol	23.08	26.88
TraesCS4A01G489400.1	Wheat	cytosol	25.85	24.71
TraesCS5A01G344200.2	Wheat	peroxisome	29.54	24.18
TraesCS4A01G489100.1	Wheat	cytosol	25.23	24.12
TraesCS4A01G487600.1	Wheat	nucleus	27.38	16.73
TraesCS4A01G492400.1	Wheat	cytosol	20.92	15.49
TraesCS2A01G023400.1	Wheat	cytosol, endoplasmic reticulum, plastid, vacuole	37.54	12.45
TraesCS7A01G464600.1	Wheat	cytosol, nucleus, plasma membrane	37.85	11.44
TraesCS4A01G457900.1	Wheat	cytosol	26.77	8.56
TraesCS7A01G031300.2	Wheat	cytosol	26.46	8.45
TraesCS4A01G223400.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid	32.31	7.9
TraesCS7A01G032200.1	Wheat	cytosol	26.77	7.57
TraesCS7A01G524300.1	Wheat	plasma membrane	21.85	7.26
TraesCS7A01G005100.3	Wheat	cytosol	25.54	6.93
TraesCS5A01G344100.1	Wheat	nucleus	30.15	6.61
TraesCS7A01G007200.1	Wheat	cytosol	17.23	6.22
TraesCS4A01G464900.1	Wheat	nucleus	24.92	6.16
TraesCS4A01G491300.1	Wheat	plasma membrane	24.92	6.13
TraesCS2A01G564800.1	Wheat	cytosol	23.69	5.92
TraesCS7A01G004100.1	Wheat	cytosol	27.38	5.89
TraesCS4A01G486700.1	Wheat	cytosol	27.08	5.79
TraesCS4A01G488300.1	Wheat	cytosol	27.08	5.77
TraesCS5A01G325800.1	Wheat	cytosol	25.23	5.65
TraesCS4A01G349800.1	Wheat	cytosol	32.92	5.27
TraesCS7A01G006700.1	Wheat	mitochondrion	3.38	4.85
TraesCS4A01G461800.1	Wheat	endoplasmic reticulum, golgi	24.31	4.09
TraesCS4A01G467000.1	Wheat	cytosol	11.08	4.02
TraesCS7A01G027800.1	Wheat	golgi	24.62	3.78
TraesCS2A01G564200.1	Wheat	cytosol	21.23	3.64
TraesCS7A01G007600.1	Wheat	endoplasmic reticulum, golgi	0.62	0.34
TraesCS7A01G006800.1	Wheat	cytosol	0.31	0.27
TraesCS7A01G004300.1	Wheat	cytosol	0.62	0.19
TraesCS7A01G006600.3	Wheat	cytosol	0.0	0.0
TraesCS5A01G481100.1	Wheat	cytosol	0.0	0.0
TraesCS5A01G344300.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G489500.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G489200.1	Wheat	extracellular	0.0	0.0
TraesCS4A01G487700.1	Wheat	cytoskeleton, cytosol, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3A01G009300.1	EnsemblPlantsGene:TraesCS3A01G009300	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PFAM:PF00931	SUPFAM:SSF52540
TIGR:cd14798	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:8549930..8550907

Molecular Weight (calculated)

37693.3 Da

IEP (calculated)

10.868

GRAVY (calculated)

-0.496

Length

325 amino acids

Sequence
(BLAST)

001: MELGPISASL GAMRSLPRKL HELLATKHRI LRGIVMDEIE QLTADLRIQY SFMLVLSTAQ DPAMSARYWM KDVRELSYDM EDFADQFIQA HGRSKIFSLK
101: RRHHAHGRAK IRRAILRKLI YRMKDMGEPS YDMVKFVDQF IHAHGRAKIR RATCRKLVSR LKISRLPGRR RWRSWITNMV SEFRTRAQEA TRRCQRYKLD
201: DCVSNSGYSR IGHELPTMLQ DPSDLVGIED AMDELERWLT DGKKPLKVAS IVGVGGIGKT TLAQKLWGKL HVQFECGAFV RTAQKPDMRG ILRNILLQVR
301: PHQPPDAGEM HHLINDLRQY LQGKR

Best Arabidopsis Sequence Match ( AT1G58807.2 )
(BLAST)

001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNM LSSFLKDANA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
401: FNDDNNNTCN NVLSLSFEEL PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
501: MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
601: KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL
701: NIKLIEETSL ETLAASIGGL KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR LEEDPMPILE KLLQLKELEL
801: GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS MPLLRTLDIQ IHCRL

Arabidopsis Description

RDL5Probable disease resistance protein RF45 [Source:UniProtKB/Swiss-Prot;Acc:F4IBE4]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.