Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24023 | Sorghum | nucleus | 65.67 | 62.34 |
| Os11t0686400-00 | Rice | cytosol | 49.09 | 55.19 |
| EER98716 | Sorghum | nucleus | 72.92 | 50.82 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 13.95 | 48.28 |
| Os11t0686900-00 | Rice | cytosol, peroxisome, plasma membrane | 35.33 | 47.85 |
| Os11t0684100-01 | Rice | cytosol | 50.36 | 46.33 |
| Os11t0685600-00 | Rice | cytosol, nucleus, peroxisome | 16.12 | 45.76 |
| Os05t0479700-00 | Rice | cytosol | 26.81 | 42.96 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 50.09 | 41.02 |
| TraesCS5B01G344200.1 | Wheat | nucleus | 50.18 | 39.32 |
| HORVU5Hr1G099940.3 | Barley | mitochondrion, nucleus | 33.51 | 38.22 |
| OQU83234 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 28.99 | 38.1 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 18.75 | 36.06 |
| HORVU5Hr1G085900.5 | Barley | nucleus | 49.46 | 34.71 |
| OQU83390 | Sorghum | nucleus | 30.25 | 33.33 |
| TraesCS5B01G344100.2 | Wheat | cytosol | 29.98 | 32.61 |
| KXG28913 | Sorghum | cytosol | 23.91 | 32.16 |
| TraesCS7A01G008100.1 | Wheat | cytosol | 8.33 | 28.57 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | Gene3D:4.10.280.10 | UniProt:A0A1B6QBT5 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR001611 | InterPro:IPR011598 | InterPro:IPR032675 | InterPro:IPR036638 | EnsemblPlants:KXG35388 |
| ProteinID:KXG35388 | ProteinID:KXG35388.1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00010 | PFAM:PF00931 | PRINTS:PR00364 | PFscan:PS50888 | PFscan:PS51450 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF1 | InterPro:RX-like_CC | SMART:SM00353 | EnsemblPlantsGene:SORBI_3002G168400 | SUPFAM:SSF47459 | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI00081AE629 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:52723803..52728620
Molecular Weight (calculated)
124746.0 Da
IEP (calculated)
8.438
GRAVY (calculated)
-0.194
Length
1104 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAPTSPLDG PILKLPWKLD KLLRHGFILP KGVEDEIPLI KRDLGEIISI LSNLDDHHAM KVSCWRKEVR ELSYDMEDFV DQYEHATAMS LAGSVPRRKI
0101: IQKRKSKAAL SRPWKKLKQR LWMANKIREF SMRTQEALQR HRMYHLDAIA VSGSTTSTRC TCTDACSNSS HSTPCGEENA YVGISAAMEK LQELLLTMHD
0201: EGDWRLKVVS IVGLGGIGKT TLANEFYRKL GPQFECRAFV RTSQKPDTRR IFISMLSQIR PHQLPDNWTV HSLISTIRTH LQDKRYLIIV EDICVTTTWD
0301: IVKCALPDNN CGSRILTTTE IEDLALASSD HDPKFVYKMQ PLSEDDSRKL FFSSLCGIQH ECPPNLREIS YNVISKCGGL PLAIVTVASI LSSQQGIQDQ
0401: LDYVNKSIGY SLLMNPISEG MKQVLDLSYN SLPQNLKACI LYTGLYEEDI IIWKDDLVNQ WIAEGFIEAT EGQDKKEIAR SYFDRLISRK LILPVYINKN
0501: GEVLSCVVHR MVLNLVIRYK SIEENFVTPI HNSQATTTLS DKVRRLSLQF GNAEDAIPPT NMRLSQVRTV AFWGVLKCLP TIVQFTLLQV LILHFWGDKD
0601: SINFDLNRIS ELFRLRYLKV TSNVTLELGN QMRGLDTLET LTIDARVNAI PSDIVHLPGL LHFSVPPETD LPNGISHMTS LRTLGYFDLS SNSIENVQSL
0701: SMLTNLVDLK LTCSTVQVQT EHMYNKMELL LNTVLGRLSS LKSLTLVPRA SSYANSIHDP GTTGMIISGG LCSLLSAPGL LQSLEISPWI YIFLCPPKWI
0801: GQLHNLCILK FGVIKIDRDD VNVLRGLPAL AVLSLYVQTK PAERVVIGKT GFPVIKYFRF KCCGPWLKFE EGAMPNLRKL KLAFNACNPV ELITIPVGIR
0901: YLSNLKEVSA KIGGASPDES HRKARATELA LRDEIRVHGR CQRVNIQCVK QIIGGKDDQS YITTVEDHVT LKLKQNKIKD EDEENSIEQV EITKDHSRAH
1001: QFSLPKTKTS SETAAVAVDK LLHFHDALPL KTTTHPRSIA ERERRMKISE RIRKLQELVP NMDKQSNIPD MLDLAVDYIK DLQKQIKALN ESRARCSCSA
1101: SKHQ
0101: IQKRKSKAAL SRPWKKLKQR LWMANKIREF SMRTQEALQR HRMYHLDAIA VSGSTTSTRC TCTDACSNSS HSTPCGEENA YVGISAAMEK LQELLLTMHD
0201: EGDWRLKVVS IVGLGGIGKT TLANEFYRKL GPQFECRAFV RTSQKPDTRR IFISMLSQIR PHQLPDNWTV HSLISTIRTH LQDKRYLIIV EDICVTTTWD
0301: IVKCALPDNN CGSRILTTTE IEDLALASSD HDPKFVYKMQ PLSEDDSRKL FFSSLCGIQH ECPPNLREIS YNVISKCGGL PLAIVTVASI LSSQQGIQDQ
0401: LDYVNKSIGY SLLMNPISEG MKQVLDLSYN SLPQNLKACI LYTGLYEEDI IIWKDDLVNQ WIAEGFIEAT EGQDKKEIAR SYFDRLISRK LILPVYINKN
0501: GEVLSCVVHR MVLNLVIRYK SIEENFVTPI HNSQATTTLS DKVRRLSLQF GNAEDAIPPT NMRLSQVRTV AFWGVLKCLP TIVQFTLLQV LILHFWGDKD
0601: SINFDLNRIS ELFRLRYLKV TSNVTLELGN QMRGLDTLET LTIDARVNAI PSDIVHLPGL LHFSVPPETD LPNGISHMTS LRTLGYFDLS SNSIENVQSL
0701: SMLTNLVDLK LTCSTVQVQT EHMYNKMELL LNTVLGRLSS LKSLTLVPRA SSYANSIHDP GTTGMIISGG LCSLLSAPGL LQSLEISPWI YIFLCPPKWI
0801: GQLHNLCILK FGVIKIDRDD VNVLRGLPAL AVLSLYVQTK PAERVVIGKT GFPVIKYFRF KCCGPWLKFE EGAMPNLRKL KLAFNACNPV ELITIPVGIR
0901: YLSNLKEVSA KIGGASPDES HRKARATELA LRDEIRVHGR CQRVNIQCVK QIIGGKDDQS YITTVEDHVT LKLKQNKIKD EDEENSIEQV EITKDHSRAH
1001: QFSLPKTKTS SETAAVAVDK LLHFHDALPL KTTTHPRSIA ERERRMKISE RIRKLQELVP NMDKQSNIPD MLDLAVDYIK DLQKQIKALN ESRARCSCSA
1101: SKHQ
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.