Factsheet for TraesCS4D01G002400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0685600-00	Rice	cytosol, nucleus, peroxisome	29.62	43.7
TraesCS5A01G344300.1	Wheat	cytosol	37.63	36.61
Os05t0479700-00	Rice	cytosol	34.67	28.88
Os11t0686900-00	Rice	cytosol, peroxisome, plasma membrane	36.93	26.01
TraesCS1D01G028900.1	Wheat	cytosol	33.28	22.93
Os11t0686400-00	Rice	cytosol	37.11	21.69
KXG24023	Sorghum	nucleus	38.33	18.92
KXG35388	Sorghum	cytosol	36.06	18.75
Os11t0684100-01	Rice	cytosol	39.02	18.67
TraesCS7D01G452200.1	Wheat	cytosol	31.36	18.61
TraesCS5D01G349800.2	Wheat	nucleus	41.46	17.66
TraesCS7D01G513100.2	Wheat	cytosol	25.78	14.8
TraesCS2D01G024500.2	Wheat	cytosol	19.69	14.73
EER98716	Sorghum	nucleus	40.24	14.58
TraesCS3D01G491500.2	Wheat	cytosol	24.22	13.71
TraesCS7D01G027700.2	Wheat	cytosol	24.04	13.61
TraesCS4D01G089900.1	Wheat	plastid	30.14	13.06
TraesCS7D01G020700.1	Wheat	nucleus	27.18	12.34
TraesCS7D01G022400.1	Wheat	nucleus	27.18	11.86
TraesCS1D01G040300.1	Wheat	cytosol	34.15	11.79
TraesCS5D01G494600.1	Wheat	cytosol	14.46	11.23
TraesCS5D01G332000.1	Wheat	cytosol	28.57	11.22
TraesCS7D01G005400.1	Wheat	cytosol, nucleus, peroxisome	26.66	11.18
TraesCS2D01G511600.2	Wheat	nucleus	26.48	10.69
TraesCS2D01G004500.1	Wheat	cytosol	21.43	10.04
TraesCS2D01G574600.1	Wheat	cytosol	33.1	9.66
TraesCS7D01G004600.1	Wheat	cytosol	25.61	9.63
TraesCS7D01G007300.2	Wheat	cytosol, plastid	25.78	9.61
TraesCS7D01G007900.1	Wheat	cytosol	25.61	9.6
TraesCS7D01G024900.1	Wheat	golgi	34.49	9.42
TraesCS1D01G381400.1	Wheat	cytosol, nucleus, plastid	24.39	8.92
TraesCS4D01G002300.1	Wheat	cytosol	2.44	4.39
TraesCS5D01G492000.1	Wheat	cytosol	0.17	0.34
TraesCS5D01G522000.1	Wheat	cytosol, plastid	0.0	0.0
TraesCS7D01G005300.1	Wheat	cytosol	0.0	0.0
TraesCS5A01G344200.2	Wheat	peroxisome	0.0	0.0
TraesCS2D01G574800.1	Wheat	cytosol	0.0	0.0

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	Gene3D:3.80.10.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR032675	InterPro:IPR036955	InterPro:LRR_dom_sf	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR43889	PANTHER:PTHR43889:SF1	SMART:SM00380	SUPFAM:SSF52058	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS4D01G002400
EnsemblPlants:TraesCS4D01G002400.1	TIGR:cd00018	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:1288444..1290808

Molecular Weight (calculated)

62895.8 Da

IEP (calculated)

7.792

GRAVY (calculated)

-0.096

Length

574 amino acids

Sequence
(BLAST)

001: MRLSQVRTLA FFGIFKCVPS IVEFKLLQVL ILHFWGDEDG ISLDITGIWE LYRLRYMQVT CNVILELRTQ MRDLRSFPRL LHLKLPAETR LPDGIGHMTS
101: LHTLGYFDLS SNSAENVQSL GELTNLQDLQ LARCTVQTDN LKNNMQCLGM ILGKLSNLKS VTLVPAGSSH VDGMSMSVSG DGLSSISSPP AFLERLELSP
201: HVCIFSSLPE WIGHLARLSI LKIAVCELVK NDLDILRGLP GLTVLSLHVC TKLTERIVFE KAGFSVLKYL KFKSSVPWLK FEADAMPNLR KLKLVFNDTG
301: VELESHSTAP VGIEQLLGLE DISAKIGGGG ADARAALMTA VSSHPRNPRI NVKLVDCMIY ADGSSRISVP PEPSSRLPVP DATTRSDVEL KLLNEIEEPK
401: TLPLPLDQQV IPPHPQPPRY RGVRKRPWGR YAAEIRDPGK KSRVWLGTYD SAEEAARAYD VAAREYRGPK AKTNFPLTAA PWATCVKAKV ATASHISSNE
501: PSALTTDSSF AAAPWVSTAP RLNLAASHSS SDEPSALNTD DDSFTAAPGV STTLRLSLPP ASPSHSSIEE SRYM

Best Arabidopsis Sequence Match ( AT3G15210.1 )
(BLAST)

001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA

Arabidopsis Description

ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.