Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G005300.1 | Wheat | cytosol | 20.38 | 81.82 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 81.81 | 73.11 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 80.28 | 72.02 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 80.13 | 71.23 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 38.42 | 51.87 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 38.28 | 51.68 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 44.85 | 48.58 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 43.1 | 44.87 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 42.15 | 40.58 |
| TraesCS2D01G024500.2 | Wheat | cytosol | 22.57 | 40.29 |
| Os10t0370100-01 | Rice | cytosol, plasma membrane, plastid | 36.45 | 38.47 |
| TraesCS5D01G494600.1 | Wheat | cytosol | 19.94 | 36.94 |
| TraesCS5D01G332000.1 | Wheat | cytosol | 39.23 | 36.73 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 25.93 | 36.71 |
| TraesCS1D01G028900.1 | Wheat | cytosol | 21.91 | 36.01 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 7.96 | 33.96 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 38.28 | 33.38 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 7.67 | 32.92 |
| Os11t0462900-00 | Rice | plasma membrane | 37.98 | 32.79 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 23.67 | 32.4 |
| TraesCS4D01G089900.1 | Wheat | plastid | 27.1 | 28.0 |
| TraesCS5D01G349800.2 | Wheat | nucleus | 27.03 | 27.45 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 11.18 | 26.66 |
| TraesCS5D01G492000.1 | Wheat | cytosol | 5.62 | 25.93 |
| TraesCS2D01G574800.1 | Wheat | cytosol | 4.67 | 24.06 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 19.8 | 22.12 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 26.08 | 21.48 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 27.32 | 19.02 |
| TraesCS7D01G024900.1 | Wheat | golgi | 26.88 | 17.5 |
Protein Annotations
| Gene3D:2.120.10.80 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | InterPro:IPR013087 | InterPro:IPR015915 |
| InterPro:IPR032675 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PFAM:PF01344 | PRINTS:PR00364 | ScanProsite:PS00028 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF7 |
| SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS7D01G005400 | EnsemblPlants:TraesCS7D01G005400.1 |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:2606560..2611522
Molecular Weight (calculated)
154451.0 Da
IEP (calculated)
7.137
GRAVY (calculated)
-0.180
Length
1369 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQDHGVIADE QDKVVLFYPT QDVSVGGRGR EMDASFSVSL GAMRPLLKKL DMMLGPHGCK LTKGVNDRCQ LLKDELEEIA TYLEDLLKVE DPPLAAKCWM
0101: KEAHELSYDI LDCIDNFVPP DQSLGYKFDH NMTHVKIPKR LKWQKQIEYA APDVSGHVIS KTIRVDVTCA PKRLKWYQQI VEKVSEFRIY AQEVVRRYDR
0201: YQVHCCSTSV ASRFSAIGPM MPMPPPPCEK TCSGLVIDGR MSKFINSQLA NDENRQLRVV SIHGSGCLGK TMLAKVLYNK LGRQFHCRAF IRVSKKPDMK
0301: RLFCDMLSQI QRKHPQASED ASDELHITTE NIRNYLHAKR YLIVVDDLWD TSAWDFINQL LPKCIKGSRI ITTTQIEDVA LACCCDDPEQ VFEMKPLDDD
0401: HSRKLFFGRI FGSESDCPEE FKQVSSQIVE ICGGLPLATI SIASLLANQP SVSMELFTHI HDSFISLLSS NLTSERTTQV LNLSYNSLPY YLKTCLLHLS
0501: MYPEGSIIFK HDLVRQWMAE GFLAASEGKN MEEVAGLYFD ELVDRRFIQP MSINFNNEVV SCTVHAVVHD LIAHKSAEEN FLVILDYNRK NLTLSHKVRR
0601: LSLQLGDAKY AKIPENMRKS QVRSLGVFGL SECMPCIGEF KLVRVLNLHL SSHHNGDQDL AIDLTGISEL FHLIYLKIVC DVCIKLPGCM RGLQCLETLD
0701: VMDTPRGTHV PWDIIYLPHL LHLSLPLDTY LLDWVVGIRT LGMLNHLEDL YIPTPPSSDH DHVKRSMGAL GTLIGRHGSL KTVKLVAHRS SVKYDDASKA
0801: TINWFNVAPP ANLQRFECSP HSRIIFDEIP WGKRRLGHLC ILKIEVRELL VNDVDILRGM PALTALSLYV EMAPSVKIIF GMAVGFTALK YFKLKFASGI
0901: AWLKFEADAM PNLWKLKLVF NYIPRMDQRL NLFSKPDQWK QYRHGTALIS INHMTGLREV SAKFGGAAAD LQYVSRIGVV INHPGNPVIS VQLVDSGSDG
1001: DKRISSESSS GLHPPGADGG EQQDVVSWSN TIGVIGRELF IYCLHRMSRW DYGSIASLNR DFNSVVRNGE IYRLRRKNGV AEHWLYLSCS DPHEWEAYDP
1101: STGRWIQVPK MPPAQSILWE SLAVGTELLV FGNEGVALRY SILTNSWTWL ADAMYPPRYL FGSASAGEKA YVAGGKVSYV SYLSSAEMYD SEAHTWTPLP
1201: NMNRARHKCS GAFMDGKFYV IGGVTRSREL LTCGEEYDLN RRSWRVIDNM SQGLNSTAIG APPLIAVVNN ELYGADYSVN NDLKQYDKLD NKWITLGKLP
1301: VLSKDKDGWD MGFRACGDRL IVIGSPNNSS DEKAVELHSW TPDEQPPLWN LFATRPYGGD QILCTVMGC
0101: KEAHELSYDI LDCIDNFVPP DQSLGYKFDH NMTHVKIPKR LKWQKQIEYA APDVSGHVIS KTIRVDVTCA PKRLKWYQQI VEKVSEFRIY AQEVVRRYDR
0201: YQVHCCSTSV ASRFSAIGPM MPMPPPPCEK TCSGLVIDGR MSKFINSQLA NDENRQLRVV SIHGSGCLGK TMLAKVLYNK LGRQFHCRAF IRVSKKPDMK
0301: RLFCDMLSQI QRKHPQASED ASDELHITTE NIRNYLHAKR YLIVVDDLWD TSAWDFINQL LPKCIKGSRI ITTTQIEDVA LACCCDDPEQ VFEMKPLDDD
0401: HSRKLFFGRI FGSESDCPEE FKQVSSQIVE ICGGLPLATI SIASLLANQP SVSMELFTHI HDSFISLLSS NLTSERTTQV LNLSYNSLPY YLKTCLLHLS
0501: MYPEGSIIFK HDLVRQWMAE GFLAASEGKN MEEVAGLYFD ELVDRRFIQP MSINFNNEVV SCTVHAVVHD LIAHKSAEEN FLVILDYNRK NLTLSHKVRR
0601: LSLQLGDAKY AKIPENMRKS QVRSLGVFGL SECMPCIGEF KLVRVLNLHL SSHHNGDQDL AIDLTGISEL FHLIYLKIVC DVCIKLPGCM RGLQCLETLD
0701: VMDTPRGTHV PWDIIYLPHL LHLSLPLDTY LLDWVVGIRT LGMLNHLEDL YIPTPPSSDH DHVKRSMGAL GTLIGRHGSL KTVKLVAHRS SVKYDDASKA
0801: TINWFNVAPP ANLQRFECSP HSRIIFDEIP WGKRRLGHLC ILKIEVRELL VNDVDILRGM PALTALSLYV EMAPSVKIIF GMAVGFTALK YFKLKFASGI
0901: AWLKFEADAM PNLWKLKLVF NYIPRMDQRL NLFSKPDQWK QYRHGTALIS INHMTGLREV SAKFGGAAAD LQYVSRIGVV INHPGNPVIS VQLVDSGSDG
1001: DKRISSESSS GLHPPGADGG EQQDVVSWSN TIGVIGRELF IYCLHRMSRW DYGSIASLNR DFNSVVRNGE IYRLRRKNGV AEHWLYLSCS DPHEWEAYDP
1101: STGRWIQVPK MPPAQSILWE SLAVGTELLV FGNEGVALRY SILTNSWTWL ADAMYPPRYL FGSASAGEKA YVAGGKVSYV SYLSSAEMYD SEAHTWTPLP
1201: NMNRARHKCS GAFMDGKFYV IGGVTRSREL LTCGEEYDLN RRSWRVIDNM SQGLNSTAIG APPLIAVVNN ELYGADYSVN NDLKQYDKLD NKWITLGKLP
1301: VLSKDKDGWD MGFRACGDRL IVIGSPNNSS DEKAVELHSW TPDEQPPLWN LFATRPYGGD QILCTVMGC
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.