Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G085900.5 | Barley | nucleus | 89.99 | 77.11 |
| TraesCS5B01G344200.1 | Wheat | nucleus | 60.01 | 57.42 |
| TraesCS5A01G344100.1 | Wheat | nucleus | 62.09 | 56.48 |
| Os11t0686400-00 | Rice | cytosol | 41.02 | 56.31 |
| TraesCS4D01G002300.1 | Wheat | cytosol | 12.83 | 54.23 |
| KXG24023 | Sorghum | nucleus | 43.99 | 50.99 |
| TraesCS5B01G344100.2 | Wheat | cytosol | 37.83 | 50.25 |
| KXG35388 | Sorghum | cytosol | 41.02 | 50.09 |
| Os11t0685600-00 | Rice | cytosol, nucleus, peroxisome | 14.24 | 49.36 |
| Os11t0684100-01 | Rice | cytosol | 42.66 | 47.92 |
| Os11t0686900-00 | Rice | cytosol, peroxisome, plasma membrane | 28.19 | 46.63 |
| Os05t0479700-00 | Rice | cytosol | 23.81 | 46.59 |
| TraesCS1D01G028900.1 | Wheat | cytosol | 28.49 | 46.1 |
| TraesCS7D01G452200.1 | Wheat | cytosol | 31.01 | 43.23 |
| TraesCS2D01G024500.2 | Wheat | cytosol | 24.55 | 43.16 |
| TraesCS5D01G494600.1 | Wheat | cytosol | 22.85 | 41.68 |
| TraesCS4D01G002400.1 | Wheat | endoplasmic reticulum, golgi | 17.66 | 41.46 |
| EER98716 | Sorghum | nucleus | 46.29 | 39.39 |
| TraesCS3D01G491500.2 | Wheat | cytosol | 26.48 | 35.21 |
| TraesCS7D01G027700.2 | Wheat | cytosol | 26.41 | 35.11 |
| TraesCS7D01G513100.2 | Wheat | cytosol | 26.04 | 35.1 |
| TraesCS4D01G089900.1 | Wheat | plastid | 31.6 | 32.15 |
| TraesCS7D01G020700.1 | Wheat | nucleus | 28.64 | 30.54 |
| TraesCS7D01G022400.1 | Wheat | nucleus | 29.01 | 29.73 |
| TraesCS7D01G005300.1 | Wheat | cytosol | 7.49 | 29.62 |
| TraesCS5D01G522000.1 | Wheat | cytosol, plastid | 6.82 | 28.66 |
| TraesCS5D01G332000.1 | Wheat | cytosol | 29.67 | 27.36 |
| TraesCS7D01G005400.1 | Wheat | cytosol, nucleus, peroxisome | 27.45 | 27.03 |
| TraesCS1D01G040300.1 | Wheat | cytosol | 33.31 | 27.02 |
| TraesCS2D01G004500.1 | Wheat | cytosol | 24.26 | 26.69 |
| TraesCS2D01G511600.2 | Wheat | nucleus | 27.52 | 26.09 |
| TraesCS1D01G381400.1 | Wheat | cytosol, nucleus, plastid | 28.34 | 24.33 |
| TraesCS7D01G004600.1 | Wheat | cytosol | 27.52 | 24.31 |
| TraesCS7D01G007900.1 | Wheat | cytosol | 27.45 | 24.15 |
| TraesCS7D01G007300.2 | Wheat | cytosol, plastid | 27.52 | 24.09 |
| TraesCS2D01G574800.1 | Wheat | cytosol | 4.53 | 22.93 |
| TraesCS5D01G492000.1 | Wheat | cytosol | 4.67 | 21.21 |
| TraesCS2D01G574600.1 | Wheat | cytosol | 30.93 | 21.21 |
| TraesCS7D01G024900.1 | Wheat | golgi | 32.34 | 20.73 |
Protein Annotations
| Gene3D:1.10.8.430 | MapMan:15.5.22 | Gene3D:2.20.25.80 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043531 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR032675 | InterPro:IPR036576 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF03106 | PRINTS:PR00364 | PFscan:PS50811 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF1 | InterPro:RX-like_CC | SMART:SM00774 | SUPFAM:SSF118290 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS5D01G349800 | EnsemblPlants:TraesCS5D01G349800.2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | TIGR:cd14798 | SEG:seg |
Description
No Description!
Coordinates
chr5D:+:434540867..434546149
Molecular Weight (calculated)
151823.0 Da
IEP (calculated)
7.140
GRAVY (calculated)
-0.359
Length
1348 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADAMFRLPE KLDGLLSSHG QMLPRGVEEE IPLIKQDLEK MVAILQQHDD SGAEDCAMTA KCLAKEVREL SYDMEDSVDQ YEQAATTSRW IAPRLKKHKF
0101: ARRRVTRLPE KLRWRLWMAN KMREFSLRSQ EALQRYSLFN HHGDNGIRAA AIGGTGSSTP PRHDTCFGSW YPTPYEELVG IGEHVNNLEA WLGRDGEQRL
0201: KVVTVVGSGG IGKSTLVKEL YRRIRGQFEC RAFVRTSRKP DIRRLLISML SQVRPHQTSH TWKLHSLIAD IRTHLQDKRY LIVIDDVWAT QTWDIVSRAL
0301: PDGNLCSGVL ITTEIDDVAL KCGGYDSKYV LPMKPLGHDD SSKLFFRTAF GPQYECPPEL SDVANNIIRK CAGFPLAVVT VAGLLVNQMG KPEQWDFVNK
0401: SLGYGLRKNP APEGMKQVLN LSYNNLRLHL KACLMYLSIY EEDYIIQKND LVKQWIAEGF IHATEEKDMV EISRICFDEL ISSRMIEPVH INDTGDVLSC
0501: TVHHMVLDFI THKSLEENFV TAIDHCQTTA RLADKVRRLS LHFGNAEATP PTNMRLSQVR TLAYFGVIKC LPSIVEFGLL QILILHLWGD DDSISFDLTG
0601: ISELFRLRYL HVTCNATLEV PQTQIRGLRY LETLKIDARV SAVPSDIVHL PGLLHLSLPV EINLPNGIGR MTSLCTLECF DISVNSVENV HSLGELTNLH
0701: DLRLTCSTVH SCYLTSKMDS MCSILTKLSN LRSLTLEPSS ILDVGPSSMS ISCDGLSSVS SPPACLQTFE WLPRICTFSS LPKWIGRLSK LCILKIGVRK
0801: LANNDFDILR GLPALTVLSL HIRTKPAKRI LFNKIGFSVL KYFKFRCRAP WLEFEVDAMP NLLKLKLRFD AHGVDQHGTI PVGIVHLTGL KEMSAKIGGA
0901: GANDPDRRAA ESALIDAIKM HPACPTLSIH CLDAMFSGED DDIKKEDSIE HMTLQKQYDV KKEDSIEHMT LQKQYGIKKE DSIEHTTLQE QYDIKNEDLI
1001: EHMTLQIQND IKKEDSYKQH GFLQKDYRKT LPKWSTQVRV SSLQDIEGHD DGFSWRKYGQ KDILGSRNPR GYYRCTHHNT RGCQALKQLQ ATDGDPLLFN
1101: AIYVGNHTCT QGANSQPQPG YEQSSISVGD KAEGSIQRLE KMPPRRSKRS IQVRVRSMQD DYPADDGYSW SKYGQKDILG SKHPRGYYRC VHRPEKGCEA
1201: TKQVQRSDSD TQLFDVVYHG EHTCAENVHS RGESARSLPH HVSVSAGVIP PATSESQVTY EAVSSGSTAG IHFMSPATSA GSQVTYESGS RSTTTGRFIS
1301: PGMSESQVAY AEFWTWPNNV DFMLNSPINE RLDLNADFVD ETGPSDFD
0101: ARRRVTRLPE KLRWRLWMAN KMREFSLRSQ EALQRYSLFN HHGDNGIRAA AIGGTGSSTP PRHDTCFGSW YPTPYEELVG IGEHVNNLEA WLGRDGEQRL
0201: KVVTVVGSGG IGKSTLVKEL YRRIRGQFEC RAFVRTSRKP DIRRLLISML SQVRPHQTSH TWKLHSLIAD IRTHLQDKRY LIVIDDVWAT QTWDIVSRAL
0301: PDGNLCSGVL ITTEIDDVAL KCGGYDSKYV LPMKPLGHDD SSKLFFRTAF GPQYECPPEL SDVANNIIRK CAGFPLAVVT VAGLLVNQMG KPEQWDFVNK
0401: SLGYGLRKNP APEGMKQVLN LSYNNLRLHL KACLMYLSIY EEDYIIQKND LVKQWIAEGF IHATEEKDMV EISRICFDEL ISSRMIEPVH INDTGDVLSC
0501: TVHHMVLDFI THKSLEENFV TAIDHCQTTA RLADKVRRLS LHFGNAEATP PTNMRLSQVR TLAYFGVIKC LPSIVEFGLL QILILHLWGD DDSISFDLTG
0601: ISELFRLRYL HVTCNATLEV PQTQIRGLRY LETLKIDARV SAVPSDIVHL PGLLHLSLPV EINLPNGIGR MTSLCTLECF DISVNSVENV HSLGELTNLH
0701: DLRLTCSTVH SCYLTSKMDS MCSILTKLSN LRSLTLEPSS ILDVGPSSMS ISCDGLSSVS SPPACLQTFE WLPRICTFSS LPKWIGRLSK LCILKIGVRK
0801: LANNDFDILR GLPALTVLSL HIRTKPAKRI LFNKIGFSVL KYFKFRCRAP WLEFEVDAMP NLLKLKLRFD AHGVDQHGTI PVGIVHLTGL KEMSAKIGGA
0901: GANDPDRRAA ESALIDAIKM HPACPTLSIH CLDAMFSGED DDIKKEDSIE HMTLQKQYDV KKEDSIEHMT LQKQYGIKKE DSIEHTTLQE QYDIKNEDLI
1001: EHMTLQIQND IKKEDSYKQH GFLQKDYRKT LPKWSTQVRV SSLQDIEGHD DGFSWRKYGQ KDILGSRNPR GYYRCTHHNT RGCQALKQLQ ATDGDPLLFN
1101: AIYVGNHTCT QGANSQPQPG YEQSSISVGD KAEGSIQRLE KMPPRRSKRS IQVRVRSMQD DYPADDGYSW SKYGQKDILG SKHPRGYYRC VHRPEKGCEA
1201: TKQVQRSDSD TQLFDVVYHG EHTCAENVHS RGESARSLPH HVSVSAGVIP PATSESQVTY EAVSSGSTAG IHFMSPATSA GSQVTYESGS RSTTTGRFIS
1301: PGMSESQVAY AEFWTWPNNV DFMLNSPINE RLDLNADFVD ETGPSDFD
001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
Arabidopsis Description
RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.