Factsheet for TraesCS4D01G002300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G344200.2	Wheat	peroxisome	56.74	45.59
TraesCS5D01G522000.1	Wheat	cytosol, plastid	32.29	32.09
TraesCS7D01G005300.1	Wheat	cytosol	31.97	29.91
TraesCS2D01G574800.1	Wheat	cytosol	20.38	24.44
TraesCS5D01G492000.1	Wheat	cytosol	18.81	20.2
Os11t0686900-00	Rice	cytosol, peroxisome, plasma membrane	44.2	17.3
Os11t0686400-00	Rice	cytosol	51.1	16.6
Os11t0684100-01	Rice	cytosol	53.6	14.25
KXG35388	Sorghum	cytosol	48.28	13.95
KXG24023	Sorghum	nucleus	47.65	13.07
Os05t0479700-00	Rice	cytosol	28.21	13.06
TraesCS5D01G349800.2	Wheat	nucleus	54.23	12.83
TraesCS2D01G024500.2	Wheat	cytosol	29.78	12.39
TraesCS7D01G452200.1	Wheat	cytosol	33.54	11.07
TraesCS5D01G494600.1	Wheat	cytosol	25.39	10.96
EER98716	Sorghum	nucleus	47.34	9.53
TraesCS7D01G027700.2	Wheat	cytosol	29.15	9.17
TraesCS3D01G491500.2	Wheat	cytosol	29.15	9.17
TraesCS7D01G513100.2	Wheat	cytosol	26.65	8.5
TraesCS7D01G020700.1	Wheat	nucleus	33.54	8.47
TraesCS4D01G089900.1	Wheat	plastid	34.48	8.3
TraesCS7D01G022400.1	Wheat	nucleus	33.54	8.14
TraesCS1D01G028900.1	Wheat	cytosol	21.0	8.04
TraesCS7D01G005400.1	Wheat	cytosol, nucleus, peroxisome	32.92	7.67
TraesCS5D01G332000.1	Wheat	cytosol	34.17	7.46
TraesCS7D01G007300.2	Wheat	cytosol, plastid	33.86	7.01
TraesCS7D01G007900.1	Wheat	cytosol	33.54	6.98
TraesCS2D01G511600.2	Wheat	nucleus	31.03	6.96
TraesCS7D01G004600.1	Wheat	cytosol	32.92	6.88
TraesCS1D01G040300.1	Wheat	cytosol	34.17	6.56
TraesCS1D01G381400.1	Wheat	cytosol, nucleus, plastid	28.21	5.73
TraesCS2D01G004500.1	Wheat	cytosol	19.75	5.14
TraesCS7D01G024900.1	Wheat	golgi	30.41	4.61
TraesCS2D01G574600.1	Wheat	cytosol	26.96	4.37
TraesCS4D01G002400.1	Wheat	endoplasmic reticulum, golgi	4.39	2.44
Os11t0685600-00	Rice	cytosol, nucleus, peroxisome	0.94	0.77
TraesCS5A01G344300.1	Wheat	cytosol	1.25	0.68

Protein Annotations

EnsemblPlants:TraesCS4D01G002300.1	EnsemblPlantsGene:TraesCS4D01G002300	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF1
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chr4D:+:1286302..1287883

Molecular Weight (calculated)

36595.2 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.380

Length

319 amino acids

Sequence
(BLAST)

001: MEAPLCGLVD AMSKLPAKLD GLLRYRHMLP NGAQDEIPLI KKDLQKMLTI LQDDGNSRAM VKCLMKELRE LSYDIDDCID HYEHAADSMS RRSYFRIPRR
101: QNSFTLRNTK TTWLPEKLKL RLWMANKIRE FSVRSQEALQ HFYDYGGTST ATRCDVSFGS WHPTLYYEEH AKHLLVGIDA LMSKLEASLS KDEEHKLKVV
201: SVLGSGGVGK TTLVNELYRK IEGQFECRAF VRTSKRPDIR RLLISLLSQV APNHLPDNWK VHNLIGSIRT HLQDKRYLIV IDDVWASSTW EIVKCALPDA
301: FGPQHECPPE LTEVSNSVL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.