Factsheet for TraesCS5D01G522000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G002300.1	Wheat	cytosol	32.09	32.29
TraesCS7D01G005300.1	Wheat	cytosol	32.09	30.21
TraesCS2D01G574800.1	Wheat	cytosol	24.61	29.7
TraesCS5D01G492000.1	Wheat	cytosol	22.74	24.58
HORVU5Hr1G118880.7	Barley	cytosol	90.03	22.16
TraesCS5B01G521200.1	Wheat	cytosol	79.13	18.72
TraesCS4D01G089900.1	Wheat	plastid	55.45	13.43
TraesCS4A01G349800.1	Wheat	cytosol	84.74	13.41
Os11t0225300-01	Rice	cytosol	52.96	13.07
TraesCS5D01G494600.1	Wheat	cytosol	29.91	12.99
TraesCS2D01G024500.2	Wheat	cytosol	30.22	12.65
TraesCS7D01G452200.1	Wheat	cytosol	35.83	11.89
TraesCS3D01G491500.2	Wheat	cytosol	34.89	11.05
TraesCS7D01G027700.2	Wheat	cytosol	34.89	11.05
TraesCS7D01G020700.1	Wheat	nucleus	37.69	9.57
TraesCS7D01G513100.2	Wheat	cytosol	27.41	8.8
TraesCS7D01G022400.1	Wheat	nucleus	35.2	8.59
TraesCS2D01G511600.2	Wheat	nucleus	35.83	8.09
TraesCS7D01G005400.1	Wheat	cytosol, nucleus, peroxisome	33.96	7.96
TraesCS7D01G007900.1	Wheat	cytosol	35.51	7.44
TraesCS5D01G332000.1	Wheat	cytosol	33.33	7.32
TraesCS7D01G004600.1	Wheat	cytosol	34.58	7.27
TraesCS7D01G007300.2	Wheat	cytosol, plastid	34.58	7.21
TraesCS5D01G349800.2	Wheat	nucleus	28.66	6.82
TraesCS1D01G028900.1	Wheat	cytosol	16.51	6.36
TraesCS1D01G381400.1	Wheat	cytosol, nucleus, plastid	30.53	6.24
TraesCS1D01G040300.1	Wheat	cytosol	29.59	5.72
TraesCS2D01G004500.1	Wheat	cytosol	17.13	4.49
TraesCS2D01G574600.1	Wheat	cytosol	27.41	4.48
TraesCS7D01G024900.1	Wheat	golgi	29.28	4.47
TraesCS4D01G002400.1	Wheat	endoplasmic reticulum, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5D01G522000.1	EnsemblPlantsGene:TraesCS5D01G522000	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR43889	PANTHER:PTHR43889:SF32	PFAM:PF00931
PRINTS:PR00364	SUPFAM:SSF52540	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:542679857..542681089

Molecular Weight (calculated)

36471.5 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.193

Length

321 amino acids

Sequence
(BLAST)

001: MAEMSSSLAV TGAAMDAPVS SSLGVMGPLL KKIDSLLPLD YRLRGPLKDR VALLKVDLEE ISVALVEQSM VDFPNEMAKY WMNEVRELCY DIEDFIDDMM
101: LTHADAKMRS VQSFKVGRVK IPWLPKTVRP CTRAARIAEL RALVREAIER HGRYLDGCTS SSRSLFTVYG HIPLMYAEAA NYLVGVDDTK TKLIKWITDE
201: EQHPAETTNY LVGVNDVKIK LIKWLTDENE QQLKMVVITG HAGVGKTTLA KQLYREVGQQ FECRAFVRAS RKPDMRRLLE GILSQVQQHR CPSNSYTVQN
301: LIDNLIKHLQ NKRYVIVIDD L

Best Arabidopsis Sequence Match ( AT3G46710.1 )
(BLAST)

001: MVDAITEFVV GKIDNYLIEE APMLIGVKDD LEELKTELTC IQVYLKNVEV CDKEDEVSKE WTKLVLDIAY DVEDVLDTYF LKLEKRLHRL GLMRLTNIIS
101: DKKDAYNILD DIKTLKRRTL DVTRKLEMYG IGNFNEHRVV ASTSRVREVR RARSDDQEER VVGLTDDAKV LLTKLLDDDG DNKIYMISIF GMEGLGKTSL
201: ARKLFNSSDV KESFEYRVWT NVSGECNTRD ILMRIISSLE ETSEGELEKM AQQELEVYLH DILQEKRYLV VVDDIWESEA LESLKRALPC SYQGSRVIIT
301: TSIRVVAEGR DKRVYTHNIR FLTFKESWNL FEKKAFRYIL KVDQELQKIG KEMVQKCGGL PRTTVVLAGL MSRKKPNEWN DVWSSLRVKD DNIHVSSLFD
401: LSFKDMGHEL KLCFLYLSVF PEDYEVDVEK LIQLLVAEGF IQEDEEMTME DVARYYIEDL VYISLVEVVK RKKGKLMSFR IHDLVREFTI KKSKELNFVN
501: VYDEQHSSTT SRREVVHHLM DDNYLCDRRV NTQMRSFLFF GKRRNDITYV ETITLKLKLL RVLNLGGLHF ICQGYSPWSL PDVIGGLVHL RYLGIADTVV
601: NNLPDFISNL RFLQTLDASG NSFERMTDLS NLTSLRHLTG RFIGELLIGD AVNLQTLRSI SSYSWSKLKH ELLINLRDLE IYEFHILNDQ IKVPLDLVSL
701: SKLKNLRVLK IEVVSFSLFS EETVRFELLV KLTLHCDVRR LPRDMDLIFP SLESLTLVTN LQEDPMPTLQ KLQRLENLVL YSCVYPGAKM FINAQGFGRL
801: RKLKVIIKRL DELEIEEEAM PCLMKLNLDN KDGATKLMIP DRMRAFV

Arabidopsis Description

RPP13L2Putative disease resistance RPP13-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.